Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FBXW4P1-201ENST00000426721 2239 ntBASIC19.74■□□□□ 0.75
PTP4A1Q93096 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A1Q93096 AL137060.1-201ENST00000618151 2648 ntBASIC19.73■□□□□ 0.75
PTP4A1Q93096 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A1Q93096 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A1Q93096 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PTP4A1Q93096 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.73■□□□□ 0.75
PTP4A1Q93096 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A1Q93096 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTP4A1Q93096 MIR4787-201ENST00000607364 84 ntBASIC19.73■□□□□ 0.75
PTP4A1Q93096 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.73■□□□□ 0.75
PTP4A1Q93096 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTP4A1Q93096 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A1Q93096 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A1Q93096 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PTP4A1Q93096 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A1Q93096 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
PTP4A1Q93096 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.72■□□□□ 0.75
PTP4A1Q93096 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.72■□□□□ 0.75
PTP4A1Q93096 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A1Q93096 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A1Q93096 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PTP4A1Q93096 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PTP4A1Q93096 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.72■□□□□ 0.75
PTP4A1Q93096 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.72■□□□□ 0.75
PTP4A1Q93096 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PTP4A1Q93096 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A1Q93096 SLC25A24-204ENST00000569674 2357 ntBASIC19.72■□□□□ 0.75
PTP4A1Q93096 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.72■□□□□ 0.75
PTP4A1Q93096 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PTP4A1Q93096 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTP4A1Q93096 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A1Q93096 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A1Q93096 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.71■□□□□ 0.75
PTP4A1Q93096 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A1Q93096 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PTP4A1Q93096 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A1Q93096 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.71■□□□□ 0.75
PTP4A1Q93096 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.71■□□□□ 0.75
PTP4A1Q93096 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A1Q93096 AC092028.1-203ENST00000608262 953 ntBASIC19.71■□□□□ 0.75
PTP4A1Q93096 AL035685.1-201ENST00000636663 812 ntBASIC19.71■□□□□ 0.75
PTP4A1Q93096 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PTP4A1Q93096 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTP4A1Q93096 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PTP4A1Q93096 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTP4A1Q93096 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PTP4A1Q93096 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.7■□□□□ 0.74
PTP4A1Q93096 DUX4L4-201ENST00000566884 1269 ntBASIC19.7■□□□□ 0.74
PTP4A1Q93096 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PTP4A1Q93096 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.7■□□□□ 0.74
PTP4A1Q93096 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTP4A1Q93096 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PTP4A1Q93096 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PTP4A1Q93096 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PTP4A1Q93096 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PTP4A1Q93096 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PTP4A1Q93096 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTP4A1Q93096 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTP4A1Q93096 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.69■□□□□ 0.74
PTP4A1Q93096 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PTP4A1Q93096 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.69■□□□□ 0.74
PTP4A1Q93096 AL121603.2-201ENST00000557373 2117 ntBASIC19.69■□□□□ 0.74
PTP4A1Q93096 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
PTP4A1Q93096 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTP4A1Q93096 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.69■□□□□ 0.74
PTP4A1Q93096 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.69■□□□□ 0.74
PTP4A1Q93096 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTP4A1Q93096 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTP4A1Q93096 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTP4A1Q93096 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.69■□□□□ 0.74
PTP4A1Q93096 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTP4A1Q93096 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PTP4A1Q93096 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.68■□□□□ 0.74
PTP4A1Q93096 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.68■□□□□ 0.74
PTP4A1Q93096 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.68■□□□□ 0.74
PTP4A1Q93096 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PTP4A1Q93096 LINC01960-201ENST00000563759 1884 ntBASIC19.68■□□□□ 0.74
PTP4A1Q93096 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PTP4A1Q93096 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.68■□□□□ 0.74
PTP4A1Q93096 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.68■□□□□ 0.74
PTP4A1Q93096 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.68■□□□□ 0.74
PTP4A1Q93096 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTP4A1Q93096 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTP4A1Q93096 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTP4A1Q93096 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.67■□□□□ 0.74
PTP4A1Q93096 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms