Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
RTL9Q8NET4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
RTL9Q8NET4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
RTL9Q8NET4 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
RTL9Q8NET4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
RTL9Q8NET4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RTL9Q8NET4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.3■■□□□ 1.96
RTL9Q8NET4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.3■■□□□ 1.96
RTL9Q8NET4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC27.3■■□□□ 1.96
RTL9Q8NET4 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RTL9Q8NET4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC27.3■■□□□ 1.96
RTL9Q8NET4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RTL9Q8NET4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RTL9Q8NET4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC27.3■■□□□ 1.96
RTL9Q8NET4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC27.3■■□□□ 1.96
RTL9Q8NET4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RTL9Q8NET4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RTL9Q8NET4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RTL9Q8NET4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
RTL9Q8NET4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RTL9Q8NET4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RTL9Q8NET4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RTL9Q8NET4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RTL9Q8NET4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.29■■□□□ 1.96
RTL9Q8NET4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC27.29■■□□□ 1.96
RTL9Q8NET4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RTL9Q8NET4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC27.28■■□□□ 1.96
RTL9Q8NET4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC27.28■■□□□ 1.96
RTL9Q8NET4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RTL9Q8NET4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC27.28■■□□□ 1.96
RTL9Q8NET4 AC010141.3-201ENST00000456659 717 ntBASIC27.28■■□□□ 1.96
RTL9Q8NET4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC27.28■■□□□ 1.96
RTL9Q8NET4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC27.28■■□□□ 1.96
RTL9Q8NET4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RTL9Q8NET4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RTL9Q8NET4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RTL9Q8NET4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC27.28■■□□□ 1.96
RTL9Q8NET4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.27■■□□□ 1.96
RTL9Q8NET4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.27■■□□□ 1.96
RTL9Q8NET4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RTL9Q8NET4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
RTL9Q8NET4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
RTL9Q8NET4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.96
RTL9Q8NET4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.26■■□□□ 1.95
RTL9Q8NET4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
RTL9Q8NET4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC27.26■■□□□ 1.95
RTL9Q8NET4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RTL9Q8NET4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
RTL9Q8NET4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
RTL9Q8NET4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RTL9Q8NET4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
RTL9Q8NET4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC27.26■■□□□ 1.95
RTL9Q8NET4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC27.25■■□□□ 1.95
RTL9Q8NET4 KRT18P61-201ENST00000585825 1298 ntBASIC27.25■■□□□ 1.95
RTL9Q8NET4 NTF6G-201ENST00000591094 616 ntBASIC27.25■■□□□ 1.95
RTL9Q8NET4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
RTL9Q8NET4 AC087239.1-201ENST00000622671 572 ntBASIC27.25■■□□□ 1.95
RTL9Q8NET4 AC092068.2-201ENST00000590491 1708 ntBASIC27.25■■□□□ 1.95
RTL9Q8NET4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
RTL9Q8NET4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
RTL9Q8NET4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
RTL9Q8NET4 ID1-201ENST00000376105 1233 ntBASIC27.24■■□□□ 1.95
RTL9Q8NET4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC27.24■■□□□ 1.95
RTL9Q8NET4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC27.24■■□□□ 1.95
RTL9Q8NET4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC27.24■■□□□ 1.95
RTL9Q8NET4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RTL9Q8NET4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC27.24■■□□□ 1.95
RTL9Q8NET4 SMUG1P1-201ENST00000590640 811 ntBASIC27.24■■□□□ 1.95
RTL9Q8NET4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC27.24■■□□□ 1.95
RTL9Q8NET4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
RTL9Q8NET4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RTL9Q8NET4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RTL9Q8NET4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RTL9Q8NET4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
RTL9Q8NET4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
RTL9Q8NET4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC27.23■■□□□ 1.95
RTL9Q8NET4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RTL9Q8NET4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RTL9Q8NET4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC27.23■■□□□ 1.95
RTL9Q8NET4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC27.23■■□□□ 1.95
RTL9Q8NET4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC27.23■■□□□ 1.95
RTL9Q8NET4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
RTL9Q8NET4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
RTL9Q8NET4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RTL9Q8NET4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
RTL9Q8NET4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RTL9Q8NET4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC27.23■■□□□ 1.95
RTL9Q8NET4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.23■■□□□ 1.95
RTL9Q8NET4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
RTL9Q8NET4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC27.22■■□□□ 1.95
RTL9Q8NET4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.22■■□□□ 1.95
RTL9Q8NET4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RTL9Q8NET4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.22■■□□□ 1.95
RTL9Q8NET4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
RTL9Q8NET4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC27.22■■□□□ 1.95
RTL9Q8NET4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC27.22■■□□□ 1.95
RTL9Q8NET4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC27.22■■□□□ 1.95
RTL9Q8NET4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RTL9Q8NET4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC27.21■■□□□ 1.95
RTL9Q8NET4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms