Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.84■□□□□ 0.93
ARHGEF39Q8N4T4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ARHGEF39Q8N4T4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ARHGEF39Q8N4T4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARHGEF39Q8N4T4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ARHGEF39Q8N4T4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.84■□□□□ 0.93
ARHGEF39Q8N4T4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
ARHGEF39Q8N4T4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.84■□□□□ 0.93
ARHGEF39Q8N4T4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
ARHGEF39Q8N4T4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.83■□□□□ 0.93
ARHGEF39Q8N4T4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
ARHGEF39Q8N4T4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
ARHGEF39Q8N4T4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.83■□□□□ 0.93
ARHGEF39Q8N4T4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.83■□□□□ 0.93
ARHGEF39Q8N4T4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.83■□□□□ 0.93
ARHGEF39Q8N4T4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.83■□□□□ 0.93
ARHGEF39Q8N4T4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
ARHGEF39Q8N4T4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
ARHGEF39Q8N4T4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 TSPY26P-201ENST00000476365 1326 ntBASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 AC068587.7-201ENST00000641602 218 ntBASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
ARHGEF39Q8N4T4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.81■□□□□ 0.92
ARHGEF39Q8N4T4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.8■□□□□ 0.92
ARHGEF39Q8N4T4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.79■□□□□ 0.92
ARHGEF39Q8N4T4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 IRS3P-201ENST00000223076 1006 ntBASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 MIR572-201ENST00000384983 95 ntBASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ARHGEF39Q8N4T4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ARHGEF39Q8N4T4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ARHGEF39Q8N4T4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.77■□□□□ 0.92
ARHGEF39Q8N4T4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.77■□□□□ 0.91
ARHGEF39Q8N4T4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.76■□□□□ 0.91
ARHGEF39Q8N4T4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARHGEF39Q8N4T4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARHGEF39Q8N4T4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARHGEF39Q8N4T4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ARHGEF39Q8N4T4 LINC01960-201ENST00000563759 1884 ntBASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms