Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.71■■□□□ 1.23
SLC44A3Q8N4M1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.71■■□□□ 1.23
SLC44A3Q8N4M1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.71■■□□□ 1.23
SLC44A3Q8N4M1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.71■■□□□ 1.23
SLC44A3Q8N4M1 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.71■■□□□ 1.23
SLC44A3Q8N4M1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SLC44A3Q8N4M1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SLC44A3Q8N4M1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SLC44A3Q8N4M1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SLC44A3Q8N4M1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SLC44A3Q8N4M1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SLC44A3Q8N4M1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
SLC44A3Q8N4M1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
SLC44A3Q8N4M1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
SLC44A3Q8N4M1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.7■■□□□ 1.22
SLC44A3Q8N4M1 SMUG1P1-201ENST00000590640 811 ntBASIC22.7■■□□□ 1.22
SLC44A3Q8N4M1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.7■■□□□ 1.22
SLC44A3Q8N4M1 AC068587.7-201ENST00000641602 218 ntBASIC22.7■■□□□ 1.22
SLC44A3Q8N4M1 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SLC44A3Q8N4M1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SLC44A3Q8N4M1 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SLC44A3Q8N4M1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
SLC44A3Q8N4M1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SLC44A3Q8N4M1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SLC44A3Q8N4M1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SLC44A3Q8N4M1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
SLC44A3Q8N4M1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.69■■□□□ 1.22
SLC44A3Q8N4M1 CD99P1-205ENST00000527459 561 ntBASIC22.69■■□□□ 1.22
SLC44A3Q8N4M1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SLC44A3Q8N4M1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SLC44A3Q8N4M1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SLC44A3Q8N4M1 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
SLC44A3Q8N4M1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
SLC44A3Q8N4M1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.66■■□□□ 1.22
SLC44A3Q8N4M1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.66■■□□□ 1.22
SLC44A3Q8N4M1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.66■■□□□ 1.22
SLC44A3Q8N4M1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SLC44A3Q8N4M1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC22.66■■□□□ 1.22
SLC44A3Q8N4M1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.66■■□□□ 1.22
SLC44A3Q8N4M1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC44A3Q8N4M1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SLC44A3Q8N4M1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
SLC44A3Q8N4M1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC44A3Q8N4M1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SLC44A3Q8N4M1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.65■■□□□ 1.22
SLC44A3Q8N4M1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SLC44A3Q8N4M1 AC142086.2-201ENST00000569753 217 ntBASIC22.65■■□□□ 1.22
SLC44A3Q8N4M1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.65■■□□□ 1.22
SLC44A3Q8N4M1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SLC44A3Q8N4M1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
SLC44A3Q8N4M1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
SLC44A3Q8N4M1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
SLC44A3Q8N4M1 AC010141.3-201ENST00000456659 717 ntBASIC22.64■■□□□ 1.21
SLC44A3Q8N4M1 AC079140.4-201ENST00000507448 529 ntBASIC22.64■■□□□ 1.21
SLC44A3Q8N4M1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.64■■□□□ 1.21
SLC44A3Q8N4M1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SLC44A3Q8N4M1 AC004687.1-201ENST00000579003 1625 ntBASIC22.64■■□□□ 1.21
SLC44A3Q8N4M1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SLC44A3Q8N4M1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SLC44A3Q8N4M1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms