Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
ARHGEF28Q8N1W1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC30.9■■■□□ 2.54
ARHGEF28Q8N1W1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC30.9■■■□□ 2.54
ARHGEF28Q8N1W1 AC068587.7-201ENST00000641602 218 ntBASIC30.9■■■□□ 2.54
ARHGEF28Q8N1W1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
ARHGEF28Q8N1W1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC30.9■■■□□ 2.54
ARHGEF28Q8N1W1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
ARHGEF28Q8N1W1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC30.9■■■□□ 2.54
ARHGEF28Q8N1W1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC30.9■■■□□ 2.54
ARHGEF28Q8N1W1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC30.9■■■□□ 2.54
ARHGEF28Q8N1W1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
ARHGEF28Q8N1W1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC30.89■■■□□ 2.54
ARHGEF28Q8N1W1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
ARHGEF28Q8N1W1 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
ARHGEF28Q8N1W1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC30.89■■■□□ 2.54
ARHGEF28Q8N1W1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC30.88■■■□□ 2.53
ARHGEF28Q8N1W1 LINC02228-203ENST00000641970 1355 ntBASIC30.88■■■□□ 2.53
ARHGEF28Q8N1W1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
ARHGEF28Q8N1W1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC30.88■■■□□ 2.53
ARHGEF28Q8N1W1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
ARHGEF28Q8N1W1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC30.88■■■□□ 2.53
ARHGEF28Q8N1W1 SMUG1P1-201ENST00000590640 811 ntBASIC30.88■■■□□ 2.53
ARHGEF28Q8N1W1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC30.88■■■□□ 2.53
ARHGEF28Q8N1W1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC30.88■■■□□ 2.53
ARHGEF28Q8N1W1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
ARHGEF28Q8N1W1 AC004911.1-201ENST00000416316 871 ntBASIC30.87■■■□□ 2.53
ARHGEF28Q8N1W1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC30.87■■■□□ 2.53
ARHGEF28Q8N1W1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC30.87■■■□□ 2.53
ARHGEF28Q8N1W1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
ARHGEF28Q8N1W1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
ARHGEF28Q8N1W1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
ARHGEF28Q8N1W1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
ARHGEF28Q8N1W1 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC30.87■■■□□ 2.53
ARHGEF28Q8N1W1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
ARHGEF28Q8N1W1 DLX3-202ENST00000512495 834 ntTSL 2 BASIC30.87■■■□□ 2.53
ARHGEF28Q8N1W1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC30.87■■■□□ 2.53
ARHGEF28Q8N1W1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC30.86■■■□□ 2.53
ARHGEF28Q8N1W1 AC087239.1-201ENST00000622671 572 ntBASIC30.86■■■□□ 2.53
ARHGEF28Q8N1W1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC30.86■■■□□ 2.53
ARHGEF28Q8N1W1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
ARHGEF28Q8N1W1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC30.85■■■□□ 2.53
ARHGEF28Q8N1W1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
ARHGEF28Q8N1W1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
ARHGEF28Q8N1W1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ARHGEF28Q8N1W1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
ARHGEF28Q8N1W1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC30.84■■■□□ 2.53
ARHGEF28Q8N1W1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC30.84■■■□□ 2.53
ARHGEF28Q8N1W1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ARHGEF28Q8N1W1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ARHGEF28Q8N1W1 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC30.84■■■□□ 2.53
ARHGEF28Q8N1W1 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
ARHGEF28Q8N1W1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ARHGEF28Q8N1W1 AC092068.2-201ENST00000590491 1708 ntBASIC30.83■■■□□ 2.53
ARHGEF28Q8N1W1 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
ARHGEF28Q8N1W1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
ARHGEF28Q8N1W1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
ARHGEF28Q8N1W1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC30.82■■■□□ 2.52
ARHGEF28Q8N1W1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
ARHGEF28Q8N1W1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC30.82■■■□□ 2.52
ARHGEF28Q8N1W1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC30.82■■■□□ 2.52
ARHGEF28Q8N1W1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
ARHGEF28Q8N1W1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC30.82■■■□□ 2.52
ARHGEF28Q8N1W1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC30.81■■■□□ 2.52
ARHGEF28Q8N1W1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ARHGEF28Q8N1W1 AC010141.3-201ENST00000456659 717 ntBASIC30.81■■■□□ 2.52
ARHGEF28Q8N1W1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC30.81■■■□□ 2.52
ARHGEF28Q8N1W1 NTF6G-201ENST00000591094 616 ntBASIC30.81■■■□□ 2.52
ARHGEF28Q8N1W1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC30.81■■■□□ 2.52
ARHGEF28Q8N1W1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ARHGEF28Q8N1W1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC30.81■■■□□ 2.52
ARHGEF28Q8N1W1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC30.81■■■□□ 2.52
ARHGEF28Q8N1W1 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC30.81■■■□□ 2.52
ARHGEF28Q8N1W1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC30.81■■■□□ 2.52
ARHGEF28Q8N1W1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ARHGEF28Q8N1W1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
ARHGEF28Q8N1W1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ARHGEF28Q8N1W1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC30.79■■■□□ 2.52
ARHGEF28Q8N1W1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC30.79■■■□□ 2.52
ARHGEF28Q8N1W1 AC006015.1-201ENST00000429970 570 ntBASIC30.79■■■□□ 2.52
ARHGEF28Q8N1W1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
ARHGEF28Q8N1W1 AC004854.2-201ENST00000608450 1441 ntBASIC30.79■■■□□ 2.52
ARHGEF28Q8N1W1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
ARHGEF28Q8N1W1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC30.78■■■□□ 2.52
ARHGEF28Q8N1W1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC30.78■■■□□ 2.52
ARHGEF28Q8N1W1 RAP2CP1-201ENST00000605103 478 ntBASIC30.78■■■□□ 2.52
ARHGEF28Q8N1W1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC30.78■■■□□ 2.52
ARHGEF28Q8N1W1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
ARHGEF28Q8N1W1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC30.78■■■□□ 2.52
ARHGEF28Q8N1W1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC30.78■■■□□ 2.52
ARHGEF28Q8N1W1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.78■■■□□ 2.52
ARHGEF28Q8N1W1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC30.78■■■□□ 2.52
ARHGEF28Q8N1W1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ARHGEF28Q8N1W1 BX005040.4-201ENST00000637145 1518 ntBASIC30.77■■■□□ 2.52
ARHGEF28Q8N1W1 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ARHGEF28Q8N1W1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
ARHGEF28Q8N1W1 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ARHGEF28Q8N1W1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
ARHGEF28Q8N1W1 AP004607.4-201ENST00000530158 1459 ntBASIC30.76■■■□□ 2.52
ARHGEF28Q8N1W1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.52
ARHGEF28Q8N1W1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms