Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SIX5Q8N196 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC22.59■■□□□ 1.21
SIX5Q8N196 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.59■■□□□ 1.21
SIX5Q8N196 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.59■■□□□ 1.21
SIX5Q8N196 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SIX5Q8N196 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.59■■□□□ 1.21
SIX5Q8N196 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.59■■□□□ 1.21
SIX5Q8N196 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SIX5Q8N196 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SIX5Q8N196 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SIX5Q8N196 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SIX5Q8N196 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
SIX5Q8N196 AL121749.1-202ENST00000609313 2153 ntBASIC22.58■■□□□ 1.21
SIX5Q8N196 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SIX5Q8N196 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SIX5Q8N196 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.58■■□□□ 1.21
SIX5Q8N196 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SIX5Q8N196 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.58■■□□□ 1.21
SIX5Q8N196 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SIX5Q8N196 AL121832.2-201ENST00000610979 668 ntBASIC22.58■■□□□ 1.21
SIX5Q8N196 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SIX5Q8N196 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.58■■□□□ 1.2
SIX5Q8N196 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC22.57■■□□□ 1.2
SIX5Q8N196 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIX5Q8N196 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIX5Q8N196 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SIX5Q8N196 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SIX5Q8N196 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
SIX5Q8N196 AC083906.2-201ENST00000511578 360 ntBASIC22.57■■□□□ 1.2
SIX5Q8N196 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIX5Q8N196 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIX5Q8N196 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SIX5Q8N196 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SIX5Q8N196 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIX5Q8N196 AC144652.1-201ENST00000609974 1624 ntBASIC22.57■■□□□ 1.2
SIX5Q8N196 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIX5Q8N196 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIX5Q8N196 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SIX5Q8N196 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SIX5Q8N196 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.56■■□□□ 1.2
SIX5Q8N196 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SIX5Q8N196 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SIX5Q8N196 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.56■■□□□ 1.2
SIX5Q8N196 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SIX5Q8N196 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SIX5Q8N196 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.56■■□□□ 1.2
SIX5Q8N196 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SIX5Q8N196 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SIX5Q8N196 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SIX5Q8N196 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.56■■□□□ 1.2
SIX5Q8N196 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
SIX5Q8N196 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SIX5Q8N196 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.55■■□□□ 1.2
SIX5Q8N196 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SIX5Q8N196 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SIX5Q8N196 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SIX5Q8N196 TSPY6P-201ENST00000448518 926 ntBASIC22.55■■□□□ 1.2
SIX5Q8N196 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SIX5Q8N196 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.55■■□□□ 1.2
SIX5Q8N196 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SIX5Q8N196 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SIX5Q8N196 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SIX5Q8N196 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.55■■□□□ 1.2
SIX5Q8N196 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIX5Q8N196 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIX5Q8N196 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SIX5Q8N196 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.54■■□□□ 1.2
SIX5Q8N196 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.54■■□□□ 1.2
SIX5Q8N196 MFSD11-216ENST00000590393 1141 ntBASIC22.54■■□□□ 1.2
SIX5Q8N196 AL050303.2-201ENST00000619798 666 ntBASIC22.54■■□□□ 1.2
SIX5Q8N196 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.54■■□□□ 1.2
SIX5Q8N196 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIX5Q8N196 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIX5Q8N196 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SIX5Q8N196 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SIX5Q8N196 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SIX5Q8N196 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.53■■□□□ 1.2
SIX5Q8N196 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SIX5Q8N196 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SIX5Q8N196 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.53■■□□□ 1.2
SIX5Q8N196 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SIX5Q8N196 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SIX5Q8N196 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SIX5Q8N196 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.53■■□□□ 1.2
SIX5Q8N196 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.53■■□□□ 1.2
SIX5Q8N196 AC079140.4-201ENST00000507448 529 ntBASIC22.53■■□□□ 1.2
SIX5Q8N196 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC22.53■■□□□ 1.2
SIX5Q8N196 MIR4651-201ENST00000582622 73 ntBASIC22.53■■□□□ 1.2
SIX5Q8N196 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
SIX5Q8N196 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.53■■□□□ 1.2
SIX5Q8N196 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SIX5Q8N196 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SIX5Q8N196 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SIX5Q8N196 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SIX5Q8N196 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SIX5Q8N196 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SIX5Q8N196 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
SIX5Q8N196 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC22.52■■□□□ 1.2
SIX5Q8N196 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SIX5Q8N196 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms