Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC33.16■■■□□ 2.9
ABCA6Q8N139 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
ABCA6Q8N139 TFG-210ENST00000620299 1289 ntTSL 5 BASIC33.16■■■□□ 2.9
ABCA6Q8N139 TMEM202-AS1-202ENST00000565181 2325 ntBASIC33.16■■■□□ 2.9
ABCA6Q8N139 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
ABCA6Q8N139 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
ABCA6Q8N139 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC33.15■■■□□ 2.9
ABCA6Q8N139 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
ABCA6Q8N139 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC33.15■■■□□ 2.9
ABCA6Q8N139 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
ABCA6Q8N139 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC33.15■■■□□ 2.9
ABCA6Q8N139 AC069152.1-201ENST00000438030 544 ntBASIC33.14■■■□□ 2.9
ABCA6Q8N139 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC33.14■■■□□ 2.9
ABCA6Q8N139 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC33.14■■■□□ 2.9
ABCA6Q8N139 UBE2DNL-204ENST00000602536 740 ntBASIC33.14■■■□□ 2.9
ABCA6Q8N139 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
ABCA6Q8N139 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC33.14■■■□□ 2.9
ABCA6Q8N139 AC145676.1-201ENST00000514988 2004 ntBASIC33.14■■■□□ 2.9
ABCA6Q8N139 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
ABCA6Q8N139 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC33.14■■■□□ 2.89
ABCA6Q8N139 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
ABCA6Q8N139 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
ABCA6Q8N139 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC33.13■■■□□ 2.89
ABCA6Q8N139 AC079140.4-201ENST00000507448 529 ntBASIC33.13■■■□□ 2.89
ABCA6Q8N139 TESC-206ENST00000541210 936 ntTSL 3 BASIC33.13■■■□□ 2.89
ABCA6Q8N139 DUX4L16-201ENST00000555130 1264 ntBASIC33.13■■■□□ 2.89
ABCA6Q8N139 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC33.12■■■□□ 2.89
ABCA6Q8N139 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
ABCA6Q8N139 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC33.12■■■□□ 2.89
ABCA6Q8N139 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC33.12■■■□□ 2.89
ABCA6Q8N139 KLF13-207ENST00000560473 489 ntTSL 3 BASIC33.12■■■□□ 2.89
ABCA6Q8N139 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC33.12■■■□□ 2.89
ABCA6Q8N139 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC33.12■■■□□ 2.89
ABCA6Q8N139 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
ABCA6Q8N139 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC33.11■■■□□ 2.89
ABCA6Q8N139 MDK-213ENST00000617138 635 ntTSL 2 BASIC33.11■■■□□ 2.89
ABCA6Q8N139 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
ABCA6Q8N139 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ABCA6Q8N139 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ABCA6Q8N139 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC33.1■■■□□ 2.89
ABCA6Q8N139 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC33.1■■■□□ 2.89
ABCA6Q8N139 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC33.1■■■□□ 2.89
ABCA6Q8N139 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC33.1■■■□□ 2.89
ABCA6Q8N139 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC33.1■■■□□ 2.89
ABCA6Q8N139 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
ABCA6Q8N139 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
ABCA6Q8N139 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
ABCA6Q8N139 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC33.1■■■□□ 2.89
ABCA6Q8N139 OAS3-207ENST00000551007 998 ntTSL 2 BASIC33.1■■■□□ 2.89
ABCA6Q8N139 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC33.1■■■□□ 2.89
ABCA6Q8N139 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
ABCA6Q8N139 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
ABCA6Q8N139 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
ABCA6Q8N139 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC33.09■■■□□ 2.89
ABCA6Q8N139 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
ABCA6Q8N139 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
ABCA6Q8N139 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC33.09■■■□□ 2.89
ABCA6Q8N139 AC093827.2-201ENST00000512654 315 ntBASIC33.09■■■□□ 2.89
ABCA6Q8N139 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC33.09■■■□□ 2.89
ABCA6Q8N139 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
ABCA6Q8N139 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC33.08■■■□□ 2.89
ABCA6Q8N139 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC33.08■■■□□ 2.89
ABCA6Q8N139 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC33.08■■■□□ 2.89
ABCA6Q8N139 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC33.08■■■□□ 2.89
ABCA6Q8N139 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC33.08■■■□□ 2.89
ABCA6Q8N139 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
ABCA6Q8N139 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
ABCA6Q8N139 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC33.08■■■□□ 2.89
ABCA6Q8N139 EI24-211ENST00000534546 1544 ntTSL 2 BASIC33.08■■■□□ 2.89
ABCA6Q8N139 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC33.07■■■□□ 2.88
ABCA6Q8N139 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
ABCA6Q8N139 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
ABCA6Q8N139 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC33.06■■■□□ 2.88
ABCA6Q8N139 AC104187.1-201ENST00000607510 612 ntBASIC33.06■■■□□ 2.88
ABCA6Q8N139 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
ABCA6Q8N139 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
ABCA6Q8N139 KRT87P-202ENST00000534226 1464 ntBASIC33.06■■■□□ 2.88
ABCA6Q8N139 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC33.06■■■□□ 2.88
ABCA6Q8N139 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
ABCA6Q8N139 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
ABCA6Q8N139 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC33.06■■■□□ 2.88
ABCA6Q8N139 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC33.06■■■□□ 2.88
ABCA6Q8N139 AC231657.2-201ENST00000624556 255 ntBASIC33.06■■■□□ 2.88
ABCA6Q8N139 PARP1-210ENST00000629232 477 ntTSL 5 BASIC33.06■■■□□ 2.88
ABCA6Q8N139 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
ABCA6Q8N139 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC33.06■■■□□ 2.88
ABCA6Q8N139 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC33.05■■■□□ 2.88
ABCA6Q8N139 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
ABCA6Q8N139 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
ABCA6Q8N139 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
ABCA6Q8N139 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
ABCA6Q8N139 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC33.05■■■□□ 2.88
ABCA6Q8N139 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC33.05■■■□□ 2.88
ABCA6Q8N139 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
ABCA6Q8N139 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
ABCA6Q8N139 AC004687.1-201ENST00000579003 1625 ntBASIC33.04■■■□□ 2.88
ABCA6Q8N139 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
ABCA6Q8N139 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
ABCA6Q8N139 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC33.04■■■□□ 2.88
ABCA6Q8N139 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC33.04■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms