Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
SYCE1Q8N0S2 FBXW4P1-201ENST00000426721 2239 ntBASIC23.23■■□□□ 1.31
SYCE1Q8N0S2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.23■■□□□ 1.31
SYCE1Q8N0S2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SYCE1Q8N0S2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SYCE1Q8N0S2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SYCE1Q8N0S2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.22■■□□□ 1.31
SYCE1Q8N0S2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.22■■□□□ 1.31
SYCE1Q8N0S2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.22■■□□□ 1.31
SYCE1Q8N0S2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.22■■□□□ 1.31
SYCE1Q8N0S2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SYCE1Q8N0S2 AC021242.3-201ENST00000607598 1377 ntBASIC23.22■■□□□ 1.31
SYCE1Q8N0S2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SYCE1Q8N0S2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
SYCE1Q8N0S2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.22■■□□□ 1.31
SYCE1Q8N0S2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYCE1Q8N0S2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYCE1Q8N0S2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYCE1Q8N0S2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SYCE1Q8N0S2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.21■■□□□ 1.31
SYCE1Q8N0S2 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYCE1Q8N0S2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SYCE1Q8N0S2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
SYCE1Q8N0S2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
SYCE1Q8N0S2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.21■■□□□ 1.31
SYCE1Q8N0S2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
SYCE1Q8N0S2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SYCE1Q8N0S2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYCE1Q8N0S2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.18■■□□□ 1.3
SYCE1Q8N0S2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SYCE1Q8N0S2 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.18■■□□□ 1.3
SYCE1Q8N0S2 BX664725.1-201ENST00000438252 379 ntBASIC23.18■■□□□ 1.3
SYCE1Q8N0S2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC23.18■■□□□ 1.3
SYCE1Q8N0S2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYCE1Q8N0S2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYCE1Q8N0S2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SYCE1Q8N0S2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.18■■□□□ 1.3
SYCE1Q8N0S2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SYCE1Q8N0S2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC23.18■■□□□ 1.3
SYCE1Q8N0S2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYCE1Q8N0S2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.17■■□□□ 1.3
SYCE1Q8N0S2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYCE1Q8N0S2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SYCE1Q8N0S2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SYCE1Q8N0S2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.17■■□□□ 1.3
SYCE1Q8N0S2 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.17■■□□□ 1.3
SYCE1Q8N0S2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SYCE1Q8N0S2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.16■■□□□ 1.3
SYCE1Q8N0S2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYCE1Q8N0S2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC23.15■■□□□ 1.3
SYCE1Q8N0S2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SYCE1Q8N0S2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
SYCE1Q8N0S2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.15■■□□□ 1.3
SYCE1Q8N0S2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
SYCE1Q8N0S2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYCE1Q8N0S2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SYCE1Q8N0S2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.14■■□□□ 1.29
SYCE1Q8N0S2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.14■■□□□ 1.29
SYCE1Q8N0S2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.14■■□□□ 1.29
SYCE1Q8N0S2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms