Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
VRK2Q86Y07 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.33■□□□□ 0.84
VRK2Q86Y07 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
VRK2Q86Y07 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
VRK2Q86Y07 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
VRK2Q86Y07 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VRK2Q86Y07 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VRK2Q86Y07 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VRK2Q86Y07 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.32■□□□□ 0.84
VRK2Q86Y07 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.32■□□□□ 0.84
VRK2Q86Y07 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.32■□□□□ 0.84
VRK2Q86Y07 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VRK2Q86Y07 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VRK2Q86Y07 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
VRK2Q86Y07 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VRK2Q86Y07 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VRK2Q86Y07 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VRK2Q86Y07 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VRK2Q86Y07 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
VRK2Q86Y07 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VRK2Q86Y07 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.31■□□□□ 0.84
VRK2Q86Y07 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.31■□□□□ 0.84
VRK2Q86Y07 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
VRK2Q86Y07 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VRK2Q86Y07 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VRK2Q86Y07 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VRK2Q86Y07 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
VRK2Q86Y07 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VRK2Q86Y07 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VRK2Q86Y07 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VRK2Q86Y07 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VRK2Q86Y07 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VRK2Q86Y07 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VRK2Q86Y07 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
VRK2Q86Y07 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.3■□□□□ 0.84
VRK2Q86Y07 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
VRK2Q86Y07 AC092053.2-201ENST00000640557 1818 ntBASIC20.3■□□□□ 0.84
VRK2Q86Y07 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VRK2Q86Y07 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VRK2Q86Y07 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
VRK2Q86Y07 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VRK2Q86Y07 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VRK2Q86Y07 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VRK2Q86Y07 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.29■□□□□ 0.84
VRK2Q86Y07 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VRK2Q86Y07 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VRK2Q86Y07 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VRK2Q86Y07 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.29■□□□□ 0.84
VRK2Q86Y07 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.29■□□□□ 0.84
VRK2Q86Y07 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.29■□□□□ 0.84
VRK2Q86Y07 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VRK2Q86Y07 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VRK2Q86Y07 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VRK2Q86Y07 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VRK2Q86Y07 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.29■□□□□ 0.84
VRK2Q86Y07 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VRK2Q86Y07 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VRK2Q86Y07 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.28■□□□□ 0.84
VRK2Q86Y07 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VRK2Q86Y07 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
VRK2Q86Y07 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
VRK2Q86Y07 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VRK2Q86Y07 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
VRK2Q86Y07 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
VRK2Q86Y07 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.28■□□□□ 0.84
VRK2Q86Y07 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
VRK2Q86Y07 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
VRK2Q86Y07 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.28■□□□□ 0.84
VRK2Q86Y07 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.28■□□□□ 0.84
VRK2Q86Y07 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.28■□□□□ 0.84
VRK2Q86Y07 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VRK2Q86Y07 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
VRK2Q86Y07 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
VRK2Q86Y07 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VRK2Q86Y07 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VRK2Q86Y07 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VRK2Q86Y07 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
VRK2Q86Y07 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
VRK2Q86Y07 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
VRK2Q86Y07 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
VRK2Q86Y07 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.27■□□□□ 0.84
VRK2Q86Y07 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VRK2Q86Y07 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
VRK2Q86Y07 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
VRK2Q86Y07 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
VRK2Q86Y07 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
VRK2Q86Y07 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
VRK2Q86Y07 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VRK2Q86Y07 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
VRK2Q86Y07 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VRK2Q86Y07 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VRK2Q86Y07 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VRK2Q86Y07 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VRK2Q86Y07 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VRK2Q86Y07 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
VRK2Q86Y07 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.26■□□□□ 0.83
VRK2Q86Y07 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.26■□□□□ 0.83
VRK2Q86Y07 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
VRK2Q86Y07 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VRK2Q86Y07 AL499627.2-201ENST00000606283 725 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms