Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
LRRTM3Q86VH5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.29■■□□□ 1.32
LRRTM3Q86VH5 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LRRTM3Q86VH5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LRRTM3Q86VH5 AC027612.3-201ENST00000413684 1047 ntBASIC23.29■■□□□ 1.32
LRRTM3Q86VH5 YBX1P1-201ENST00000445822 960 ntBASIC23.29■■□□□ 1.32
LRRTM3Q86VH5 AL354811.1-201ENST00000610286 706 ntBASIC23.29■■□□□ 1.32
LRRTM3Q86VH5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
LRRTM3Q86VH5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.29■■□□□ 1.32
LRRTM3Q86VH5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LRRTM3Q86VH5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LRRTM3Q86VH5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LRRTM3Q86VH5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.28■■□□□ 1.32
LRRTM3Q86VH5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
LRRTM3Q86VH5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.28■■□□□ 1.32
LRRTM3Q86VH5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.28■■□□□ 1.32
LRRTM3Q86VH5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRRTM3Q86VH5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRRTM3Q86VH5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
LRRTM3Q86VH5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
LRRTM3Q86VH5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.28■■□□□ 1.32
LRRTM3Q86VH5 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LRRTM3Q86VH5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 AL162430.1-201ENST00000480705 870 ntBASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LRRTM3Q86VH5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.26■■□□□ 1.31
LRRTM3Q86VH5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.26■■□□□ 1.31
LRRTM3Q86VH5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.26■■□□□ 1.31
LRRTM3Q86VH5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRTM3Q86VH5 AC105233.4-201ENST00000642045 216 ntBASIC23.26■■□□□ 1.31
LRRTM3Q86VH5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRTM3Q86VH5 DUSP8P3-201ENST00000399571 1760 ntBASIC23.26■■□□□ 1.31
LRRTM3Q86VH5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRTM3Q86VH5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LRRTM3Q86VH5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
LRRTM3Q86VH5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LRRTM3Q86VH5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 AC092666.2-201ENST00000613287 246 ntBASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 RAB43-208ENST00000615093 783 ntTSL 5 BASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 AC068587.7-201ENST00000641602 218 ntBASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LRRTM3Q86VH5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
LRRTM3Q86VH5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC23.24■■□□□ 1.31
LRRTM3Q86VH5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRTM3Q86VH5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRTM3Q86VH5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRTM3Q86VH5 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRTM3Q86VH5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
LRRTM3Q86VH5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.24■■□□□ 1.31
LRRTM3Q86VH5 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LRRTM3Q86VH5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LRRTM3Q86VH5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 AC123595.1-201ENST00000440769 1046 ntBASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
LRRTM3Q86VH5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 AC010141.3-201ENST00000456659 717 ntBASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 DUX4L2-201ENST00000561772 1275 ntBASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 DUX4L6-201ENST00000626483 1275 ntBASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 DUX4L1-201ENST00000627662 1275 ntBASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 DUX4L8-201ENST00000629013 1275 ntBASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 DUX4L3-201ENST00000630187 1275 ntBASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 DUX4L7-201ENST00000630678 1275 ntBASIC23.22■■□□□ 1.31
LRRTM3Q86VH5 DUX4L5-201ENST00000630834 1275 ntBASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms