Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 DUX4L16-201ENST00000555130 1264 ntBASIC15.49■□□□□ 0.07
CSMD3Q7Z407 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CSMD3Q7Z407 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD3Q7Z407 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC15.48■□□□□ 0.07
CSMD3Q7Z407 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD3Q7Z407 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD3Q7Z407 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD3Q7Z407 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CSMD3Q7Z407 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD3Q7Z407 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.48■□□□□ 0.07
CSMD3Q7Z407 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CSMD3Q7Z407 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CSMD3Q7Z407 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC15.48■□□□□ 0.07
CSMD3Q7Z407 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC15.48■□□□□ 0.07
CSMD3Q7Z407 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CSMD3Q7Z407 UQCRFS1P1-201ENST00000435169 820 ntBASIC15.46■□□□□ 0.07
CSMD3Q7Z407 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 RPS2P52-201ENST00000469610 820 ntBASIC15.46■□□□□ 0.07
CSMD3Q7Z407 DUX4L4-201ENST00000566884 1269 ntBASIC15.46■□□□□ 0.07
CSMD3Q7Z407 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 MAZ-216ENST00000616501 991 ntTSL 5 BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.46■□□□□ 0.07
CSMD3Q7Z407 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
CSMD3Q7Z407 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 MARS-234ENST00000630571 216 ntTSL 5 BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 MARS-235ENST00000630803 183 ntTSL 3 BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 CNN2P6-201ENST00000439038 900 ntBASIC15.45■□□□□ 0.06
CSMD3Q7Z407 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CSMD3Q7Z407 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD3Q7Z407 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD3Q7Z407 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD3Q7Z407 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC15.44■□□□□ 0.06
CSMD3Q7Z407 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CSMD3Q7Z407 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CSMD3Q7Z407 KRT87P-202ENST00000534226 1464 ntBASIC15.44■□□□□ 0.06
CSMD3Q7Z407 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.44■□□□□ 0.06
CSMD3Q7Z407 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.44■□□□□ 0.06
CSMD3Q7Z407 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC15.44■□□□□ 0.06
CSMD3Q7Z407 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CSMD3Q7Z407 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CSMD3Q7Z407 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CSMD3Q7Z407 AC083906.2-201ENST00000511578 360 ntBASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms