Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 AL355001.2-201ENST00000620617 1191 ntBASIC20.11■□□□□ 0.81
CHMP1BQ7LBR1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP1BQ7LBR1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.11■□□□□ 0.81
CHMP1BQ7LBR1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP1BQ7LBR1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
CHMP1BQ7LBR1 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP1BQ7LBR1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CHMP1BQ7LBR1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 FP325331.1-202ENST00000623531 1380 ntBASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 AC011298.3-201ENST00000615796 283 ntBASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CHMP1BQ7LBR1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 pRNA.6-201ENST00000610482 90 ntBASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 pRNA.5-201ENST00000612139 90 ntBASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 pRNA.11-201ENST00000618423 90 ntBASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 pRNA.13-201ENST00000619112 90 ntBASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CHMP1BQ7LBR1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.08■□□□□ 0.81
CHMP1BQ7LBR1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP1BQ7LBR1 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.08■□□□□ 0.81
CHMP1BQ7LBR1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
CHMP1BQ7LBR1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
CHMP1BQ7LBR1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CHMP1BQ7LBR1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP1BQ7LBR1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CHMP1BQ7LBR1 AC006455.2-201ENST00000429931 906 ntBASIC20.08■□□□□ 0.81
CHMP1BQ7LBR1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.08■□□□□ 0.81
CHMP1BQ7LBR1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHMP1BQ7LBR1 ABCB10P4-201ENST00000566803 2184 ntBASIC20.08■□□□□ 0.8
CHMP1BQ7LBR1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.08■□□□□ 0.8
CHMP1BQ7LBR1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CHMP1BQ7LBR1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHMP1BQ7LBR1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.08■□□□□ 0.8
CHMP1BQ7LBR1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CHMP1BQ7LBR1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CHMP1BQ7LBR1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 MIR3181-201ENST00000578512 73 ntBASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 MIR4767-201ENST00000582827 78 ntBASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 LINC01529-204ENST00000636474 1715 ntBASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.06■□□□□ 0.8
CHMP1BQ7LBR1 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP1BQ7LBR1 AC144652.1-201ENST00000609974 1624 ntBASIC20.05■□□□□ 0.8
CHMP1BQ7LBR1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP1BQ7LBR1 DUSP8P5-201ENST00000422884 1815 ntBASIC20.05■□□□□ 0.8
CHMP1BQ7LBR1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP1BQ7LBR1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP1BQ7LBR1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP1BQ7LBR1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP1BQ7LBR1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP1BQ7LBR1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP1BQ7LBR1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHMP1BQ7LBR1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CHMP1BQ7LBR1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.04■□□□□ 0.8
CHMP1BQ7LBR1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHMP1BQ7LBR1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.04■□□□□ 0.8
CHMP1BQ7LBR1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms