Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC24.4■■□□□ 1.5
TRIM60Q495X7 TSPY6P-201ENST00000448518 926 ntBASIC24.4■■□□□ 1.5
TRIM60Q495X7 AC083906.2-201ENST00000511578 360 ntBASIC24.4■■□□□ 1.5
TRIM60Q495X7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.4■■□□□ 1.5
TRIM60Q495X7 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.4■■□□□ 1.5
TRIM60Q495X7 SMUG1P1-201ENST00000590640 811 ntBASIC24.4■■□□□ 1.5
TRIM60Q495X7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.4■■□□□ 1.5
TRIM60Q495X7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TRIM60Q495X7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRIM60Q495X7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TRIM60Q495X7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
TRIM60Q495X7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
TRIM60Q495X7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.39■■□□□ 1.49
TRIM60Q495X7 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRIM60Q495X7 AC079140.4-201ENST00000507448 529 ntBASIC24.39■■□□□ 1.49
TRIM60Q495X7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC24.39■■□□□ 1.49
TRIM60Q495X7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC24.39■■□□□ 1.49
TRIM60Q495X7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
TRIM60Q495X7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRIM60Q495X7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRIM60Q495X7 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TRIM60Q495X7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
TRIM60Q495X7 AC145676.1-201ENST00000514988 2004 ntBASIC24.39■■□□□ 1.49
TRIM60Q495X7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM60Q495X7 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM60Q495X7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM60Q495X7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
TRIM60Q495X7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM60Q495X7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
TRIM60Q495X7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.38■■□□□ 1.49
TRIM60Q495X7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.38■■□□□ 1.49
TRIM60Q495X7 MIR4651-201ENST00000582622 73 ntBASIC24.38■■□□□ 1.49
TRIM60Q495X7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM60Q495X7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.38■■□□□ 1.49
TRIM60Q495X7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.38■■□□□ 1.49
TRIM60Q495X7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TRIM60Q495X7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TRIM60Q495X7 GUSBP6-202ENST00000438529 1198 ntBASIC24.37■■□□□ 1.49
TRIM60Q495X7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.37■■□□□ 1.49
TRIM60Q495X7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
TRIM60Q495X7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.36■■□□□ 1.49
TRIM60Q495X7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM60Q495X7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC24.36■■□□□ 1.49
TRIM60Q495X7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.36■■□□□ 1.49
TRIM60Q495X7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC24.36■■□□□ 1.49
TRIM60Q495X7 AL138781.1-201ENST00000566567 1274 ntBASIC24.36■■□□□ 1.49
TRIM60Q495X7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.36■■□□□ 1.49
TRIM60Q495X7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM60Q495X7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM60Q495X7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
TRIM60Q495X7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TRIM60Q495X7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM60Q495X7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.35■■□□□ 1.49
TRIM60Q495X7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM60Q495X7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM60Q495X7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
TRIM60Q495X7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TRIM60Q495X7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.35■■□□□ 1.49
TRIM60Q495X7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.35■■□□□ 1.49
TRIM60Q495X7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
TRIM60Q495X7 SLC7A5P2-201ENST00000553010 536 ntBASIC24.35■■□□□ 1.49
TRIM60Q495X7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.35■■□□□ 1.49
TRIM60Q495X7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.35■■□□□ 1.49
TRIM60Q495X7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRIM60Q495X7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TRIM60Q495X7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.34■■□□□ 1.49
TRIM60Q495X7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
TRIM60Q495X7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.34■■□□□ 1.49
TRIM60Q495X7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TRIM60Q495X7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.33■■□□□ 1.49
TRIM60Q495X7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
TRIM60Q495X7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TRIM60Q495X7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.33■■□□□ 1.49
TRIM60Q495X7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC24.33■■□□□ 1.49
TRIM60Q495X7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC24.33■■□□□ 1.49
TRIM60Q495X7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.33■■□□□ 1.49
TRIM60Q495X7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.48
TRIM60Q495X7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRIM60Q495X7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TRIM60Q495X7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.32■■□□□ 1.48
TRIM60Q495X7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.32■■□□□ 1.48
TRIM60Q495X7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRIM60Q495X7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRIM60Q495X7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRIM60Q495X7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRIM60Q495X7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.32■■□□□ 1.48
TRIM60Q495X7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.32■■□□□ 1.48
TRIM60Q495X7 AC005181.1-201ENST00000604782 1256 ntBASIC24.32■■□□□ 1.48
TRIM60Q495X7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TRIM60Q495X7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TRIM60Q495X7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TRIM60Q495X7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRIM60Q495X7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC24.31■■□□□ 1.48
TRIM60Q495X7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.31■■□□□ 1.48
TRIM60Q495X7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
TRIM60Q495X7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.31■■□□□ 1.48
TRIM60Q495X7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TRIM60Q495X7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.31■■□□□ 1.48
TRIM60Q495X7 AC231657.2-201ENST00000624556 255 ntBASIC24.31■■□□□ 1.48
TRIM60Q495X7 AC068587.7-201ENST00000641602 218 ntBASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms