Protein–RNA interactions for Protein: P53836

CAF120, CCR4-NOT transcriptional complex subunit CAF120, yeastyeast

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF120P53836 AIM24YJR080C 1185 nt6.21□□□□□ -1.42
CAF120P53836 GEP5YLR091W 882 nt6.21□□□□□ -1.42
CAF120P53836 YMR158C-AYMR158C-A 138 nt6.21□□□□□ -1.42
CAF120P53836 YNL285WYNL285W 372 nt6.21□□□□□ -1.42
CAF120P53836 YOL029CYOL029C 606 nt6.21□□□□□ -1.42
CAF120P53836 YOL163WYOL163W 510 nt6.21□□□□□ -1.42
CAF120P53836 AIM10YER087W 1731 nt6.21□□□□□ -1.42
CAF120P53836 CEF1YMR213W 1773 nt6.21□□□□□ -1.42
CAF120P53836 CCC2YDR270W 3015 nt6.2□□□□□ -1.42
CAF120P53836 MIG3YER028C 1185 nt6.2□□□□□ -1.42
CAF120P53836 MEI4YER044C-A 1227 nt6.2□□□□□ -1.42
CAF120P53836 NQM1YGR043C 1002 nt6.2□□□□□ -1.42
CAF120P53836 MDE1YJR024C 735 nt6.2□□□□□ -1.42
CAF120P53836 APN1YKL114C 1104 nt6.2□□□□□ -1.42
CAF120P53836 VPS71YML041C 843 nt6.2□□□□□ -1.42
CAF120P53836 AIM33YML087C 939 nt6.2□□□□□ -1.42
CAF120P53836 OSW5YMR148W 447 nt6.2□□□□□ -1.42
CAF120P53836 YOR008W-BYOR008W-B 102 nt6.2□□□□□ -1.42
CAF120P53836 CDC28YBR160W 897 nt6.2□□□□□ -1.42
CAF120P53836 VPS4YPR173C 1314 nt6.2□□□□□ -1.42
CAF120P53836 ARE2YNR019W 1929 nt6.19□□□□□ -1.42
CAF120P53836 ACS1YAL054C 2142 nt6.19□□□□□ -1.42
CAF120P53836 MHF2YDL160C-A 243 nt6.19□□□□□ -1.42
CAF120P53836 YHR127WYHR127W 732 nt6.19□□□□□ -1.42
CAF120P53836 MRPL44YMR225C 297 nt6.19□□□□□ -1.42
CAF120P53836 RKI1YOR095C 777 nt6.19□□□□□ -1.42
CAF120P53836 NIP7YPL211W 546 nt6.19□□□□□ -1.42
CAF120P53836 QRI1YDL103C 1434 nt6.18□□□□□ -1.42
CAF120P53836 snR85snR85 171 nt6.18□□□□□ -1.42
CAF120P53836 NUS1YDL193W 1128 nt6.18□□□□□ -1.42
CAF120P53836 YDL240C-AYDL240C-A 138 nt6.18□□□□□ -1.42
CAF120P53836 YDR248CYDR248C 582 nt6.18□□□□□ -1.42
CAF120P53836 THI4YGR144W 981 nt6.18□□□□□ -1.42
CAF120P53836 YIL020C-AYIL020C-A 339 nt6.18□□□□□ -1.42
CAF120P53836 YMR052C-AYMR052C-A 366 nt6.18□□□□□ -1.42
CAF120P53836 IMP1YMR150C 573 nt6.18□□□□□ -1.42
CAF120P53836 PSF3YOL146W 585 nt6.18□□□□□ -1.42
CAF120P53836 BMT2YBR141C 1014 nt6.18□□□□□ -1.42
CAF120P53836 YGR054WYGR054W 1929 nt6.18□□□□□ -1.42
CAF120P53836 COT1YOR316C 1320 nt6.18□□□□□ -1.42
CAF120P53836 SPO1YNL012W 1896 nt6.17□□□□□ -1.42
CAF120P53836 UTP18YJL069C 1785 nt6.17□□□□□ -1.42
CAF120P53836 YDL085C-AYDL085C-A 207 nt6.17□□□□□ -1.42
CAF120P53836 GIR2YDR152W 798 nt6.17□□□□□ -1.42
CAF120P53836 RMD6YEL072W 696 nt6.17□□□□□ -1.42
CAF120P53836 YER068C-AYER068C-A 432 nt6.17□□□□□ -1.42
CAF120P53836 YHR138CYHR138C 345 nt6.17□□□□□ -1.42
CAF120P53836 SVP26YHR181W 687 nt6.17□□□□□ -1.42
CAF120P53836 AIM32YML050W 936 nt6.17□□□□□ -1.42
CAF120P53836 GTO3YMR251W 1101 nt6.17□□□□□ -1.42
CAF120P53836 RRN9YMR270C 1098 nt6.17□□□□□ -1.42
CAF120P53836 RIO2YNL207W 1278 nt6.17□□□□□ -1.42
CAF120P53836 MRPL17YNL252C 846 nt6.17□□□□□ -1.42
CAF120P53836 SVS1YPL163C 783 nt6.17□□□□□ -1.42
CAF120P53836 MAK3YPR051W 531 nt6.17□□□□□ -1.42
CAF120P53836 PDB1YBR221C 1101 nt6.17□□□□□ -1.42
CAF120P53836 GEX2YKR106W 1848 nt6.17□□□□□ -1.42
CAF120P53836 MRPL1YDR116C 858 nt6.16□□□□□ -1.42
CAF120P53836 YFL041W-AYFL041W-A 192 nt6.16□□□□□ -1.42
CAF120P53836 AAD16YFL057C 459 nt6.16□□□□□ -1.42
CAF120P53836 MAM33YIL070C 801 nt6.16□□□□□ -1.42
CAF120P53836 DAL3YIR032C 588 nt6.16□□□□□ -1.42
CAF120P53836 SEC66YBR171W 621 nt6.16□□□□□ -1.42
CAF120P53836 NUP1YOR098C 3231 nt6.16□□□□□ -1.42
CAF120P53836 YMR111CYMR111C 1389 nt6.16□□□□□ -1.42
CAF120P53836 MNS1YJR131W 1650 nt6.15□□□□□ -1.42
CAF120P53836 MRH1YDR033W 963 nt6.15□□□□□ -1.42
CAF120P53836 YDR199WYDR199W 366 nt6.15□□□□□ -1.42
CAF120P53836 YGL039WYGL039W 1047 nt6.15□□□□□ -1.42
CAF120P53836 YGL204CYGL204C 306 nt6.15□□□□□ -1.42
CAF120P53836 YGR107WYGR107W 450 nt6.15□□□□□ -1.42
CAF120P53836 RPE1YJL121C 717 nt6.15□□□□□ -1.42
CAF120P53836 ICY2YPL250C 411 nt6.15□□□□□ -1.42
CAF120P53836 SPP381YBR152W 876 nt6.15□□□□□ -1.42
CAF120P53836 ECM31YBR176W 939 nt6.15□□□□□ -1.42
CAF120P53836 AEP2YMR282C 1743 nt6.15□□□□□ -1.42
CAF120P53836 UGO1YDR470C 1509 nt6.15□□□□□ -1.43
CAF120P53836 GIP2YER054C 1647 nt6.14□□□□□ -1.43
CAF120P53836 YIL055CYIL055C 1884 nt6.14□□□□□ -1.43
CAF120P53836 MAK31YCR020C-A 267 nt6.14□□□□□ -1.43
CAF120P53836 YCR064CYCR064C 411 nt6.14□□□□□ -1.43
CAF120P53836 RSM10YDR041W 612 nt6.14□□□□□ -1.43
CAF120P53836 DFM1YDR411C 1026 nt6.14□□□□□ -1.43
CAF120P53836 YER107W-AYER107W-A 321 nt6.14□□□□□ -1.43
CAF120P53836 SPT15YER148W 723 nt6.14□□□□□ -1.43
CAF120P53836 EAF6YJR082C 342 nt6.14□□□□□ -1.43
CAF120P53836 RPS5YJR123W 678 nt6.14□□□□□ -1.43
CAF120P53836 COX17YLL009C 210 nt6.14□□□□□ -1.43
CAF120P53836 RFU1YLR073C 603 nt6.14□□□□□ -1.43
CAF120P53836 YMR031W-AYMR031W-A 327 nt6.14□□□□□ -1.43
CAF120P53836 YNL198CYNL198C 303 nt6.14□□□□□ -1.43
CAF120P53836 BUB3YOR026W 1026 nt6.14□□□□□ -1.43
CAF120P53836 TRP5YGL026C 2124 nt6.14□□□□□ -1.43
CAF120P53836 MAL13YGR288W 1422 nt6.14□□□□□ -1.43
CAF120P53836 ARP4YJL081C 1470 nt6.14□□□□□ -1.43
CAF120P53836 YER087C-AYER087C-A 552 nt6.13□□□□□ -1.43
CAF120P53836 YGR160WYGR160W 612 nt6.13□□□□□ -1.43
CAF120P53836 MEH1YKR007W 555 nt6.13□□□□□ -1.43
CAF120P53836 SRP40YKR092C 1221 nt6.13□□□□□ -1.43
CAF120P53836 SSP120YLR250W 705 nt6.13□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 37.4 ms