Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf4P43488 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.84■□□□□ 0.61
Tnfsf4P43488 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.84■□□□□ 0.61
Tnfsf4P43488 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf4P43488 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tnfsf4P43488 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tnfsf4P43488 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.83■□□□□ 0.61
Tnfsf4P43488 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.83■□□□□ 0.6
Tnfsf4P43488 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Tnfsf4P43488 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Tnfsf4P43488 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf4P43488 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf4P43488 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf4P43488 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf4P43488 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf4P43488 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf4P43488 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf4P43488 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf4P43488 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tnfsf4P43488 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf4P43488 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.82■□□□□ 0.6
Tnfsf4P43488 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf4P43488 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.82■□□□□ 0.6
Tnfsf4P43488 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf4P43488 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf4P43488 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf4P43488 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf4P43488 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf4P43488 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf4P43488 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tnfsf4P43488 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.82■□□□□ 0.6
Tnfsf4P43488 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf4P43488 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf4P43488 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf4P43488 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf4P43488 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Tnfsf4P43488 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf4P43488 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf4P43488 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf4P43488 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tnfsf4P43488 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf4P43488 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
Tnfsf4P43488 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf4P43488 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf4P43488 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf4P43488 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf4P43488 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.8■□□□□ 0.6
Tnfsf4P43488 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf4P43488 Gm22238-201ENSMUST00000175222 88 ntBASIC18.8■□□□□ 0.6
Tnfsf4P43488 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.8■□□□□ 0.6
Tnfsf4P43488 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.8■□□□□ 0.6
Tnfsf4P43488 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf4P43488 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tnfsf4P43488 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.8■□□□□ 0.6
Tnfsf4P43488 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfsf4P43488 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tnfsf4P43488 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfsf4P43488 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.79■□□□□ 0.6
Tnfsf4P43488 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfsf4P43488 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfsf4P43488 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tnfsf4P43488 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf4P43488 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf4P43488 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.78■□□□□ 0.6
Tnfsf4P43488 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.78■□□□□ 0.6
Tnfsf4P43488 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.78■□□□□ 0.6
Tnfsf4P43488 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf4P43488 Gm9959-201ENSMUST00000068277 390 ntBASIC18.78■□□□□ 0.6
Tnfsf4P43488 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf4P43488 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf4P43488 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf4P43488 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tnfsf4P43488 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfsf4P43488 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfsf4P43488 AA386476-201ENSMUST00000098781 1665 ntBASIC18.77■□□□□ 0.6
Tnfsf4P43488 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.77■□□□□ 0.6
Tnfsf4P43488 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.77■□□□□ 0.6
Tnfsf4P43488 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tnfsf4P43488 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tnfsf4P43488 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.77■□□□□ 0.59
Tnfsf4P43488 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfsf4P43488 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfsf4P43488 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfsf4P43488 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
Tnfsf4P43488 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.76■□□□□ 0.59
Tnfsf4P43488 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tnfsf4P43488 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Tnfsf4P43488 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfsf4P43488 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfsf4P43488 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfsf4P43488 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.75■□□□□ 0.59
Tnfsf4P43488 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfsf4P43488 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfsf4P43488 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.75■□□□□ 0.59
Tnfsf4P43488 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfsf4P43488 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnfsf4P43488 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfsf4P43488 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfsf4P43488 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnfsf4P43488 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms