Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 RPP1AYDL081C 321 nt3.28□□□□□ -1.88
CUP9P41817 YER076CYER076C 909 nt3.28□□□□□ -1.88
CUP9P41817 GRE3YHR104W 984 nt3.28□□□□□ -1.88
CUP9P41817 YIL163CYIL163C 354 nt3.28□□□□□ -1.88
CUP9P41817 TMA19YKL056C 504 nt3.28□□□□□ -1.88
CUP9P41817 ECM16YMR128W 3804 nt3.28□□□□□ -1.88
CUP9P41817 VPS45YGL095C 1734 nt3.27□□□□□ -1.89
CUP9P41817 SWH1YAR042W 3567 nt3.27□□□□□ -1.89
CUP9P41817 FMP32YFL046W 624 nt3.27□□□□□ -1.89
CUP9P41817 YGL108CYGL108C 423 nt3.27□□□□□ -1.89
CUP9P41817 YGL188CYGL188C 174 nt3.27□□□□□ -1.89
CUP9P41817 YGR051CYGR051C 324 nt3.27□□□□□ -1.89
CUP9P41817 ERG20YJL167W 1059 nt3.27□□□□□ -1.89
CUP9P41817 CDC8YJR057W 651 nt3.27□□□□□ -1.89
CUP9P41817 OAR1YKL055C 837 nt3.27□□□□□ -1.89
CUP9P41817 RPS0BYLR048W 759 nt3.27□□□□□ -1.89
CUP9P41817 GSC2YGR032W 5688 nt3.27□□□□□ -1.89
CUP9P41817 MCD4YKL165C 2760 nt3.26□□□□□ -1.89
CUP9P41817 UBP6YFR010W 1500 nt3.26□□□□□ -1.89
CUP9P41817 MAD3YJL013C 1548 nt3.26□□□□□ -1.89
CUP9P41817 GTT1YIR038C 705 nt3.26□□□□□ -1.89
CUP9P41817 PFA4YOL003C 1137 nt3.26□□□□□ -1.89
CUP9P41817 YOR034C-AYOR034C-A 243 nt3.26□□□□□ -1.89
CUP9P41817 FDH1YOR388C 1131 nt3.26□□□□□ -1.89
CUP9P41817 SEG1YMR086W 2883 nt3.26□□□□□ -1.89
CUP9P41817 NTH1YDR001C 2256 nt3.26□□□□□ -1.89
CUP9P41817 YPR003CYPR003C 2265 nt3.25□□□□□ -1.89
CUP9P41817 RMD1YDL001W 1293 nt3.25□□□□□ -1.89
CUP9P41817 RPA14YDR156W 414 nt3.25□□□□□ -1.89
CUP9P41817 YER134CYER134C 537 nt3.25□□□□□ -1.89
CUP9P41817 YGR161W-CYGR161W-C 279 nt3.25□□□□□ -1.89
CUP9P41817 IRC9YJL142C 393 nt3.25□□□□□ -1.89
CUP9P41817 IES3YLR052W 753 nt3.25□□□□□ -1.89
CUP9P41817 ELO3YLR372W 1038 nt3.25□□□□□ -1.89
CUP9P41817 ECM8YBR076W 1065 nt3.25□□□□□ -1.89
CUP9P41817 DER1YBR201W 636 nt3.25□□□□□ -1.89
CUP9P41817 IOC2YLR095C 2439 nt3.24□□□□□ -1.89
CUP9P41817 MNL1YHR204W 2391 nt3.24□□□□□ -1.89
CUP9P41817 SAS10YDL153C 1833 nt3.24□□□□□ -1.89
CUP9P41817 YDL183CYDL183C 963 nt3.24□□□□□ -1.89
CUP9P41817 GTF1YGR102C 552 nt3.24□□□□□ -1.89
CUP9P41817 RPL22AYLR061W 366 nt3.24□□□□□ -1.89
CUP9P41817 RAD14YMR201C 1116 nt3.24□□□□□ -1.89
CUP9P41817 OSW1YOR255W 837 nt3.24□□□□□ -1.89
CUP9P41817 TAF8YML114C 1533 nt3.24□□□□□ -1.89
CUP9P41817 POL12YBL035C 2118 nt3.23□□□□□ -1.89
CUP9P41817 DAS2YDR020C 699 nt3.23□□□□□ -1.89
CUP9P41817 COX2Q0250 756 nt3.23□□□□□ -1.89
CUP9P41817 KTR7YIL085C 1554 nt3.23□□□□□ -1.89
CUP9P41817 NSE1YLR007W 1011 nt3.23□□□□□ -1.89
CUP9P41817 ILV5YLR355C 1188 nt3.23□□□□□ -1.89
CUP9P41817 RPS1BYML063W 768 nt3.23□□□□□ -1.89
CUP9P41817 MSD1YPL104W 1977 nt3.23□□□□□ -1.89
CUP9P41817 AVT7YIL088C 1473 nt3.22□□□□□ -1.89
CUP9P41817 MTH1YDR277C 1302 nt3.22□□□□□ -1.89
CUP9P41817 CMK1YFR014C 1341 nt3.22□□□□□ -1.89
CUP9P41817 CHK1YBR274W 1584 nt3.22□□□□□ -1.89
CUP9P41817 HOM2YDR158W 1098 nt3.22□□□□□ -1.89
CUP9P41817 YDR391CYDR391C 699 nt3.22□□□□□ -1.89
CUP9P41817 MTC3YGL226W 372 nt3.22□□□□□ -1.89
CUP9P41817 HUT1YPL244C 1020 nt3.22□□□□□ -1.89
CUP9P41817 YBR137WYBR137W 540 nt3.22□□□□□ -1.89
CUP9P41817 KRE5YOR336W 4098 nt3.22□□□□□ -1.89
CUP9P41817 CHD1YER164W 4407 nt3.22□□□□□ -1.89
CUP9P41817 THI22YPR121W 1719 nt3.22□□□□□ -1.89
CUP9P41817 ELM1YKL048C 1923 nt3.21□□□□□ -1.9
CUP9P41817 SLA1YBL007C 3735 nt3.21□□□□□ -1.9
CUP9P41817 HIM1YDR317W 1245 nt3.21□□□□□ -1.9
CUP9P41817 YER067C-AYER067C-A 324 nt3.21□□□□□ -1.9
CUP9P41817 IMP4YNL075W 873 nt3.21□□□□□ -1.9
CUP9P41817 YOR289WYOR289W 756 nt3.21□□□□□ -1.9
CUP9P41817 GPI10YGL142C 1851 nt3.21□□□□□ -1.9
CUP9P41817 RRN6YBL014C 2685 nt3.2□□□□□ -1.9
CUP9P41817 ABP140YOR239W 1887 nt3.2□□□□□ -1.9
CUP9P41817 RRP17YDR412W 708 nt3.2□□□□□ -1.9
CUP9P41817 SPI1YER150W 447 nt3.2□□□□□ -1.9
CUP9P41817 YGR291CYGR291C 222 nt3.2□□□□□ -1.9
CUP9P41817 DAN1YJR150C 897 nt3.2□□□□□ -1.9
CUP9P41817 AUR1YKL004W 1206 nt3.2□□□□□ -1.9
CUP9P41817 PHA2YNL316C 1005 nt3.2□□□□□ -1.9
CUP9P41817 PLP2YOR281C 861 nt3.2□□□□□ -1.9
CUP9P41817 YBR298C-AYBR298C-A 222 nt3.2□□□□□ -1.9
CUP9P41817 PUB1YNL016W 1362 nt3.2□□□□□ -1.9
CUP9P41817 TMN2YDR107C 2019 nt3.2□□□□□ -1.9
CUP9P41817 NAM2YLR382C 2685 nt3.2□□□□□ -1.9
CUP9P41817 RIM4YHL024W 2142 nt3.2□□□□□ -1.9
CUP9P41817 AKR1YDR264C 2295 nt3.19□□□□□ -1.9
CUP9P41817 TFA1YKL028W 1449 nt3.19□□□□□ -1.9
CUP9P41817 YRM1YOR172W 2361 nt3.19□□□□□ -1.9
CUP9P41817 ALR2YFL050C 2577 nt3.19□□□□□ -1.9
CUP9P41817 OCT1YKL134C 2319 nt3.19□□□□□ -1.9
CUP9P41817 FAD1YDL045C 921 nt3.19□□□□□ -1.9
CUP9P41817 UIP3YAR027W 708 nt3.19□□□□□ -1.9
CUP9P41817 MRPS9YBR146W 837 nt3.19□□□□□ -1.9
CUP9P41817 YTM1YOR272W 1383 nt3.19□□□□□ -1.9
CUP9P41817 GCD1YOR260W 1737 nt3.19□□□□□ -1.9
CUP9P41817 UBX5YDR330W 1503 nt3.19□□□□□ -1.9
CUP9P41817 PMT6YGR199W 2280 nt3.18□□□□□ -1.9
CUP9P41817 FMP25YLR077W 1752 nt3.18□□□□□ -1.9
CUP9P41817 BDP1YNL039W 1785 nt3.18□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms