Protein–RNA interactions for Protein: P40048

PTP3, Tyrosine-protein phosphatase 3, yeastyeast

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PTP3P40048 RRN9YMR270C 1098 nt8.66□□□□□ -1.02
PTP3P40048 YSF3YNL138W-A 258 nt8.66□□□□□ -1.02
PTP3P40048 PRT1YOR361C 2292 nt8.66□□□□□ -1.02
PTP3P40048 YMR111CYMR111C 1389 nt8.65□□□□□ -1.02
PTP3P40048 YIL067CYIL067C 2037 nt8.65□□□□□ -1.02
PTP3P40048 FAU1YER183C 636 nt8.65□□□□□ -1.02
PTP3P40048 YFR034W-AYFR034W-A 288 nt8.65□□□□□ -1.02
PTP3P40048 HUR1YGL168W 333 nt8.65□□□□□ -1.02
PTP3P40048 THR1YHR025W 1074 nt8.65□□□□□ -1.02
PTP3P40048 YBL010CYBL010C 843 nt8.65□□□□□ -1.02
PTP3P40048 TSA1YML028W 591 nt8.65□□□□□ -1.02
PTP3P40048 BRX1YOL077C 876 nt8.65□□□□□ -1.02
PTP3P40048 ICY2YPL250C 411 nt8.65□□□□□ -1.02
PTP3P40048 MDM38YOL027C 1722 nt8.65□□□□□ -1.03
PTP3P40048 SMC5YOL034W 3282 nt8.65□□□□□ -1.03
PTP3P40048 CDC37YDR168W 1521 nt8.64□□□□□ -1.03
PTP3P40048 YHK8YHR048W 1545 nt8.64□□□□□ -1.03
PTP3P40048 NGR1YBR212W 2019 nt8.64□□□□□ -1.03
PTP3P40048 MRH1YDR033W 963 nt8.64□□□□□ -1.03
PTP3P40048 LSB1YGR136W 726 nt8.64□□□□□ -1.03
PTP3P40048 ICS3YJL077C 396 nt8.64□□□□□ -1.03
PTP3P40048 ARC18YLR370C 537 nt8.64□□□□□ -1.03
PTP3P40048 ATG8YBL078C 354 nt8.64□□□□□ -1.03
PTP3P40048 YOL159CYOL159C 516 nt8.64□□□□□ -1.03
PTP3P40048 MKK1YOR231W 1527 nt8.64□□□□□ -1.03
PTP3P40048 HMG2YLR450W 3138 nt8.63□□□□□ -1.03
PTP3P40048 ARP3YJR065C 1350 nt8.63□□□□□ -1.03
PTP3P40048 RPL35BYDL136W 363 nt8.63□□□□□ -1.03
PTP3P40048 YKL177WYKL177W 339 nt8.63□□□□□ -1.03
PTP3P40048 YLR171WYLR171W 390 nt8.63□□□□□ -1.03
PTP3P40048 RPL15BYMR121C 615 nt8.63□□□□□ -1.03
PTP3P40048 THI20YOL055C 1656 nt8.62□□□□□ -1.03
PTP3P40048 SLF1YDR515W 1344 nt8.62□□□□□ -1.03
PTP3P40048 ARC1YGL105W 1131 nt8.62□□□□□ -1.03
PTP3P40048 DAL3YIR032C 588 nt8.62□□□□□ -1.03
PTP3P40048 YLR126CYLR126C 756 nt8.62□□□□□ -1.03
PTP3P40048 TOM22YNL131W 459 nt8.62□□□□□ -1.03
PTP3P40048 BMT2YBR141C 1014 nt8.62□□□□□ -1.03
PTP3P40048 ARL1YBR164C 552 nt8.62□□□□□ -1.03
PTP3P40048 MRPL27YBR282W 441 nt8.62□□□□□ -1.03
PTP3P40048 YRF1-3YGR296W 5580 nt8.61□□□□□ -1.03
PTP3P40048 YRF1-6YNL339C 5580 nt8.61□□□□□ -1.03
PTP3P40048 YRF1-7YPL283C 5580 nt8.61□□□□□ -1.03
PTP3P40048 ERS1YCR075C 783 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)BtD(GUC)B 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)DtD(GUC)D 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)G1tD(GUC)G1 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)G2tD(GUC)G2 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)I1tD(GUC)I1 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)I2tD(GUC)I2 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)J1tD(GUC)J1 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)J2tD(GUC)J2 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)J3tD(GUC)J3 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)J4tD(GUC)J4 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)KtD(GUC)K 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)L1tD(GUC)L1 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)L2tD(GUC)L2 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)MtD(GUC)M 72 nt8.61□□□□□ -1.03
PTP3P40048 tD(GUC)OtD(GUC)O 72 nt8.61□□□□□ -1.03
PTP3P40048 YJR087WYJR087W 351 nt8.61□□□□□ -1.03
PTP3P40048 YBL008W-AYBL008W-A 240 nt8.61□□□□□ -1.03
PTP3P40048 NAT3YPR131C 588 nt8.61□□□□□ -1.03
PTP3P40048 YDR444WYDR444W 2064 nt8.61□□□□□ -1.03
PTP3P40048 PTC3YBL056W 1407 nt8.61□□□□□ -1.03
PTP3P40048 RCK2YLR248W 1833 nt8.61□□□□□ -1.03
PTP3P40048 IFM1YOL023W 2031 nt8.6□□□□□ -1.03
PTP3P40048 MAL31YBR298C 1845 nt8.6□□□□□ -1.03
PTP3P40048 YLR297WYLR297W 390 nt8.6□□□□□ -1.03
PTP3P40048 YPL088WYPL088W 1029 nt8.6□□□□□ -1.03
PTP3P40048 DSS4YPR017C 432 nt8.6□□□□□ -1.03
PTP3P40048 YHR214C-CYHR214C-C 1437 nt8.6□□□□□ -1.03
PTP3P40048 ISN1YOR155C 1353 nt8.6□□□□□ -1.03
PTP3P40048 COX10YPL172C 1389 nt8.6□□□□□ -1.03
PTP3P40048 YMR155WYMR155W 1644 nt8.59□□□□□ -1.03
PTP3P40048 YER145C-AYER145C-A 438 nt8.59□□□□□ -1.03
PTP3P40048 YGL260WYGL260W 231 nt8.59□□□□□ -1.03
PTP3P40048 PCL5YHR071W 690 nt8.59□□□□□ -1.03
PTP3P40048 YKL066WYKL066W 444 nt8.59□□□□□ -1.03
PTP3P40048 IES3YLR052W 753 nt8.59□□□□□ -1.03
PTP3P40048 YMR031W-AYMR031W-A 327 nt8.59□□□□□ -1.03
PTP3P40048 IMP2YMR035W 534 nt8.59□□□□□ -1.03
PTP3P40048 GEX1YCL073C 1848 nt8.59□□□□□ -1.03
PTP3P40048 YDL071CYDL071C 375 nt8.58□□□□□ -1.04
PTP3P40048 YDR535CYDR535C 501 nt8.58□□□□□ -1.04
PTP3P40048 RPL16AYIL133C 600 nt8.58□□□□□ -1.04
PTP3P40048 CTK3YML112W 891 nt8.58□□□□□ -1.04
PTP3P40048 YOP1YPR028W 543 nt8.58□□□□□ -1.04
PTP3P40048 YRF1-2YER190W 5046 nt8.58□□□□□ -1.04
PTP3P40048 CCR4YAL021C 2514 nt8.57□□□□□ -1.04
PTP3P40048 YBL113CYBL113C 2379 nt8.57□□□□□ -1.04
PTP3P40048 GAS4YOL132W 1416 nt8.57□□□□□ -1.04
PTP3P40048 SDH4YDR178W 546 nt8.57□□□□□ -1.04
PTP3P40048 PUG1YER185W 912 nt8.57□□□□□ -1.04
PTP3P40048 YGL039WYGL039W 1047 nt8.57□□□□□ -1.04
PTP3P40048 YPT35YHR105W 645 nt8.57□□□□□ -1.04
PTP3P40048 EFM4YIL064W 774 nt8.57□□□□□ -1.04
PTP3P40048 GAT4YIR013C 366 nt8.57□□□□□ -1.04
PTP3P40048 YPT7YML001W 627 nt8.57□□□□□ -1.04
PTP3P40048 TMA46YOR091W 1038 nt8.57□□□□□ -1.04
PTP3P40048 snR3snR3 194 nt8.57□□□□□ -1.04
Retrieved 100 of 7,029 protein–RNA pairs in 14.2 ms