Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 YOR200WYOR200W 399 nt5.29□□□□□ -1.56
PUB1P32588 YPR197CYPR197C 564 nt5.29□□□□□ -1.56
PUB1P32588 MRPL27YBR282W 441 nt5.29□□□□□ -1.56
PUB1P32588 FRE7YOL152W 1863 nt5.28□□□□□ -1.56
PUB1P32588 COT1YOR316C 1320 nt5.28□□□□□ -1.56 RIP-Chip
PUB1P32588 MID1YNL291C 1647 nt5.28□□□□□ -1.56 RIP-Chip
PUB1P32588 YDL183CYDL183C 963 nt5.28□□□□□ -1.56
PUB1P32588 YDL218WYDL218W 954 nt5.28□□□□□ -1.56
PUB1P32588 KEI1YDR367W 666 nt5.28□□□□□ -1.56 RIP-Chip
PUB1P32588 RPL27BYDR471W 411 nt5.28□□□□□ -1.56 RIP-Chip
PUB1P32588 VFA1YER128W 612 nt5.28□□□□□ -1.56
PUB1P32588 RPN12YFR052W 825 nt5.28□□□□□ -1.56
PUB1P32588 GTR2YGR163W 1026 nt5.28□□□□□ -1.56 RIP-Chip
PUB1P32588 ARP1YHR129C 1155 nt5.28□□□□□ -1.56
PUB1P32588 DSE2YHR143W 978 nt5.28□□□□□ -1.56 RIP-Chip
PUB1P32588 YHR213W-AYHR213W-A 234 nt5.28□□□□□ -1.56
PUB1P32588 YAL034C-BYAL034C-B 354 nt5.28□□□□□ -1.56
PUB1P32588 YAL069WYAL069W 315 nt5.28□□□□□ -1.56
PUB1P32588 ZRT2YLR130C 1269 nt5.28□□□□□ -1.56 RIP-Chip
PUB1P32588 STM1YLR150W 822 nt5.28□□□□□ -1.56
PUB1P32588 HRI1YLR301W 735 nt5.28□□□□□ -1.56
PUB1P32588 GIM5YML094W 492 nt5.28□□□□□ -1.56
PUB1P32588 DDP1YOR163W 567 nt5.28□□□□□ -1.56 RIP-Chip
PUB1P32588 PPT2YPL148C 522 nt5.28□□□□□ -1.56
PUB1P32588 SSK22YCR073C 3996 nt5.28□□□□□ -1.56
PUB1P32588 MFB1YDR219C 1398 nt5.28□□□□□ -1.56
PUB1P32588 GAS2YLR343W 1668 nt5.28□□□□□ -1.56
PUB1P32588 YRF1-4YLR466W 4149 nt5.27□□□□□ -1.57
PUB1P32588 IBA57YJR122W 1494 nt5.27□□□□□ -1.57
PUB1P32588 ADY4YLR227C 1482 nt5.27□□□□□ -1.57
PUB1P32588 MPA43YNL249C 1629 nt5.27□□□□□ -1.57
PUB1P32588 BZZ1YHR114W 1902 nt5.27□□□□□ -1.57
PUB1P32588 ATG31YDR022C 591 nt5.27□□□□□ -1.57
PUB1P32588 PEA2YER149C 1263 nt5.27□□□□□ -1.57
PUB1P32588 CIA2YHR122W 696 nt5.27□□□□□ -1.57
PUB1P32588 MOG1YJR074W 657 nt5.27□□□□□ -1.57 RIP-Chip
PUB1P32588 YLR294CYLR294C 330 nt5.27□□□□□ -1.57 RIP-Chip
PUB1P32588 YMR099CYMR099C 894 nt5.27□□□□□ -1.57
PUB1P32588 YNL285WYNL285W 372 nt5.27□□□□□ -1.57
PUB1P32588 YNL337WYNL337W 255 nt5.27□□□□□ -1.57
PUB1P32588 YOL029CYOL029C 606 nt5.27□□□□□ -1.57
PUB1P32588 ECM23YPL021W 564 nt5.27□□□□□ -1.57
PUB1P32588 CSM4YPL200W 471 nt5.27□□□□□ -1.57
PUB1P32588 DCC1YCL016C 1143 nt5.27□□□□□ -1.57
PUB1P32588 EMP47YFL048C 1338 nt5.26□□□□□ -1.57
PUB1P32588 GPA1YHR005C 1419 nt5.26□□□□□ -1.57
PUB1P32588 RSM10YDR041W 612 nt5.26□□□□□ -1.57
PUB1P32588 NKP1YDR383C 717 nt5.26□□□□□ -1.57
PUB1P32588 RPT6YGL048C 1218 nt5.26□□□□□ -1.57
PUB1P32588 YIL028WYIL028W 399 nt5.26□□□□□ -1.57
PUB1P32588 PET130YJL023C 1044 nt5.26□□□□□ -1.57
PUB1P32588 RPL40BYKR094C 387 nt5.26□□□□□ -1.57 RIP-Chip
PUB1P32588 CMC2YBL059C-A 330 nt5.26□□□□□ -1.57
PUB1P32588 YNL042W-BYNL042W-B 258 nt5.26□□□□□ -1.57
PUB1P32588 ATG3YNR007C 933 nt5.26□□□□□ -1.57 RIP-Chip
PUB1P32588 YBR062CYBR062C 543 nt5.26□□□□□ -1.57
PUB1P32588 UTP4YDR324C 2331 nt5.26□□□□□ -1.57
PUB1P32588 CTS2YDR371W 1536 nt5.26□□□□□ -1.57
PUB1P32588 GAS5YOL030W 1455 nt5.26□□□□□ -1.57 RIP-Chip
PUB1P32588 ASM4YDL088C 1587 nt5.25□□□□□ -1.57 RIP-Chip
PUB1P32588 MCM6YGL201C 3054 nt5.25□□□□□ -1.57
PUB1P32588 RSM18YER050C 417 nt5.25□□□□□ -1.57
PUB1P32588 YER158W-AYER158W-A 216 nt5.25□□□□□ -1.57
PUB1P32588 TOS8YGL096W 831 nt5.25□□□□□ -1.57 RIP-Chip
PUB1P32588 YGL199CYGL199C 471 nt5.25□□□□□ -1.57
PUB1P32588 FZF1YGL254W 900 nt5.25□□□□□ -1.57
PUB1P32588 AML1YGR001C 747 nt5.25□□□□□ -1.57
PUB1P32588 GRE3YHR104W 984 nt5.25□□□□□ -1.57
PUB1P32588 YHR125WYHR125W 306 nt5.25□□□□□ -1.57
PUB1P32588 ASG7YJL170C 630 nt5.25□□□□□ -1.57
PUB1P32588 ARV1YLR242C 966 nt5.25□□□□□ -1.57
PUB1P32588 YLR317WYLR317W 435 nt5.25□□□□□ -1.57
PUB1P32588 NIS1YNL078W 1224 nt5.25□□□□□ -1.57 RIP-Chip
PUB1P32588 RIB4YOL143C 510 nt5.25□□□□□ -1.57
PUB1P32588 YOR282WYOR282W 321 nt5.25□□□□□ -1.57
PUB1P32588 TNA1YGR260W 1605 nt5.25□□□□□ -1.57 RIP-Chip
PUB1P32588 MRE11YMR224C 2079 nt5.25□□□□□ -1.57
PUB1P32588 IME2YJL106W 1938 nt5.25□□□□□ -1.57
PUB1P32588 TBF1YPL128C 1689 nt5.24□□□□□ -1.57 RIP-Chip
PUB1P32588 PAP2YOL115W 1755 nt5.24□□□□□ -1.57
PUB1P32588 PHO5YBR093C 1404 nt5.24□□□□□ -1.57 RIP-Chip
PUB1P32588 UGO1YDR470C 1509 nt5.24□□□□□ -1.57 RIP-Chip
PUB1P32588 HSF1YGL073W 2502 nt5.24□□□□□ -1.57
PUB1P32588 MIG3YER028C 1185 nt5.24□□□□□ -1.57
PUB1P32588 IES5YER092W 378 nt5.24□□□□□ -1.57 RIP-Chip
PUB1P32588 MND1YGL183C 660 nt5.24□□□□□ -1.57
PUB1P32588 YGR160WYGR160W 612 nt5.24□□□□□ -1.57
PUB1P32588 YGR161W-CYGR161W-C 279 nt5.24□□□□□ -1.57
PUB1P32588 FUR1YHR128W 651 nt5.24□□□□□ -1.57 RIP-Chip
PUB1P32588 THP2YHR167W 786 nt5.24□□□□□ -1.57
PUB1P32588 PCL7YIL050W 858 nt5.24□□□□□ -1.57 RIP-Chip
PUB1P32588 SIW14YNL032W 846 nt5.24□□□□□ -1.57
PUB1P32588 PSF3YOL146W 585 nt5.24□□□□□ -1.57
PUB1P32588 YOR231C-AYOR231C-A 201 nt5.24□□□□□ -1.57
PUB1P32588 MAK3YPR051W 531 nt5.24□□□□□ -1.57
PUB1P32588 VTH1YIL173W 4650 nt5.24□□□□□ -1.57 RIP-Chip
PUB1P32588 VTH2YJL222W 4650 nt5.24□□□□□ -1.57 RIP-Chip
PUB1P32588 YDR109CYDR109C 2148 nt5.24□□□□□ -1.57
PUB1P32588 EAR1YMR171C 1653 nt5.24□□□□□ -1.57 RIP-Chip
PUB1P32588 PRM2YIL037C 1971 nt5.24□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms