Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC29.44■■■□□ 2.3
RXRBP28702 MARS-234ENST00000630571 216 ntTSL 5 BASIC29.44■■■□□ 2.3
RXRBP28702 MARS-235ENST00000630803 183 ntTSL 3 BASIC29.44■■■□□ 2.3
RXRBP28702 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
RXRBP28702 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC29.43■■■□□ 2.3
RXRBP28702 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC29.43■■■□□ 2.3
RXRBP28702 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
RXRBP28702 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC29.43■■■□□ 2.3
RXRBP28702 PHB2-213ENST00000546111 858 ntTSL 2 BASIC29.43■■■□□ 2.3
RXRBP28702 REXO1L12P-201ENST00000622156 912 ntBASIC29.43■■■□□ 2.3
RXRBP28702 ERN1-208ENST00000606895 2068 ntBASIC29.43■■■□□ 2.3
RXRBP28702 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RXRBP28702 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RXRBP28702 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC29.42■■■□□ 2.3
RXRBP28702 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC29.42■■■□□ 2.3
RXRBP28702 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC29.42■■■□□ 2.3
RXRBP28702 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC29.42■■■□□ 2.3
RXRBP28702 KRT18P21-201ENST00000515767 1272 ntBASIC29.42■■■□□ 2.3
RXRBP28702 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RXRBP28702 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC29.42■■■□□ 2.3
RXRBP28702 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
RXRBP28702 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC29.42■■■□□ 2.3
RXRBP28702 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RXRBP28702 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
RXRBP28702 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC29.42■■■□□ 2.3
RXRBP28702 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
RXRBP28702 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC29.41■■■□□ 2.3
RXRBP28702 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC29.41■■■□□ 2.3
RXRBP28702 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
RXRBP28702 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
RXRBP28702 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC29.4■■■□□ 2.3
RXRBP28702 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC29.4■■■□□ 2.3
RXRBP28702 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RXRBP28702 MKRN4P-201ENST00000444706 1521 ntBASIC29.4■■■□□ 2.3
RXRBP28702 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
RXRBP28702 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
RXRBP28702 PEX7-202ENST00000367756 680 ntTSL 3 BASIC29.4■■■□□ 2.3
RXRBP28702 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC29.4■■■□□ 2.3
RXRBP28702 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
RXRBP28702 MME-217ENST00000616757 1315 ntTSL 5 BASIC29.4■■■□□ 2.3
RXRBP28702 FP325331.1-202ENST00000623531 1380 ntBASIC29.39■■■□□ 2.3
RXRBP28702 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.39■■■□□ 2.3
RXRBP28702 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
RXRBP28702 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
RXRBP28702 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC29.39■■■□□ 2.3
RXRBP28702 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC29.39■■■□□ 2.3
RXRBP28702 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC29.39■■■□□ 2.3
RXRBP28702 LINC01023-201ENST00000606054 436 ntBASIC29.39■■■□□ 2.3
RXRBP28702 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RXRBP28702 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC29.38■■■□□ 2.29
RXRBP28702 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC29.38■■■□□ 2.29
RXRBP28702 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC29.38■■■□□ 2.29
RXRBP28702 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RXRBP28702 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC29.38■■■□□ 2.29
RXRBP28702 AC083880.1-201ENST00000608266 535 ntBASIC29.38■■■□□ 2.29
RXRBP28702 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
RXRBP28702 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC29.38■■■□□ 2.29
RXRBP28702 ALDH1A3-203ENST00000557963 1670 ntBASIC29.37■■■□□ 2.29
RXRBP28702 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RXRBP28702 GAS7-202ENST00000396115 929 ntTSL 5 BASIC29.37■■■□□ 2.29
RXRBP28702 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC29.37■■■□□ 2.29
RXRBP28702 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC29.37■■■□□ 2.29
RXRBP28702 UBE2SP1-201ENST00000450587 669 ntBASIC29.37■■■□□ 2.29
RXRBP28702 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RXRBP28702 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RXRBP28702 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC29.37■■■□□ 2.29
RXRBP28702 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RXRBP28702 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC29.37■■■□□ 2.29
RXRBP28702 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC29.37■■■□□ 2.29
RXRBP28702 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RXRBP28702 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC29.37■■■□□ 2.29
RXRBP28702 AL161729.1-201ENST00000604104 1402 ntBASIC29.37■■■□□ 2.29
RXRBP28702 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RXRBP28702 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
RXRBP28702 RHOD-202ENST00000532559 538 ntTSL 3 BASIC29.36■■■□□ 2.29
RXRBP28702 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RXRBP28702 MIR4497-201ENST00000583208 89 ntBASIC29.36■■■□□ 2.29
RXRBP28702 KRT87P-202ENST00000534226 1464 ntBASIC29.36■■■□□ 2.29
RXRBP28702 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RXRBP28702 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
RXRBP28702 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
RXRBP28702 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC29.35■■■□□ 2.29
RXRBP28702 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC29.34■■■□□ 2.29
RXRBP28702 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC29.34■■■□□ 2.29
RXRBP28702 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC29.34■■■□□ 2.29
RXRBP28702 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
RXRBP28702 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
RXRBP28702 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC29.34■■■□□ 2.29
RXRBP28702 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.34■■■□□ 2.29
RXRBP28702 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC29.34■■■□□ 2.29
RXRBP28702 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RXRBP28702 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
RXRBP28702 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC29.33■■■□□ 2.29
RXRBP28702 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
RXRBP28702 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RXRBP28702 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
RXRBP28702 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC29.32■■■□□ 2.28
RXRBP28702 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC29.32■■■□□ 2.28
RXRBP28702 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
RXRBP28702 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms