Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM18P0DKX4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM18P0DKX4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.14■□□□□ 0.81
SMIM18P0DKX4 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SMIM18P0DKX4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
SMIM18P0DKX4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.14■□□□□ 0.81
SMIM18P0DKX4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM18P0DKX4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM18P0DKX4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM18P0DKX4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SMIM18P0DKX4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM18P0DKX4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM18P0DKX4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.13■□□□□ 0.81
SMIM18P0DKX4 AL020996.1-203ENST00000536896 2307 ntBASIC20.13■□□□□ 0.81
SMIM18P0DKX4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SMIM18P0DKX4 MIR3960-201ENST00000583311 91 ntBASIC20.13■□□□□ 0.81
SMIM18P0DKX4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.13■□□□□ 0.81
SMIM18P0DKX4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.13■□□□□ 0.81
SMIM18P0DKX4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SMIM18P0DKX4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SMIM18P0DKX4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 FEM1AP1-201ENST00000431297 1995 ntBASIC20.12■□□□□ 0.81
SMIM18P0DKX4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 AC087741.3-201ENST00000624270 1347 ntBASIC20.12■□□□□ 0.81
SMIM18P0DKX4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.12■□□□□ 0.81
SMIM18P0DKX4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SMIM18P0DKX4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.11■□□□□ 0.81
SMIM18P0DKX4 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.11■□□□□ 0.81
SMIM18P0DKX4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.11■□□□□ 0.81
SMIM18P0DKX4 AC090877.2-201ENST00000558441 1738 ntBASIC20.11■□□□□ 0.81
SMIM18P0DKX4 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.11■□□□□ 0.81
SMIM18P0DKX4 AL022069.1-201ENST00000568025 1636 ntBASIC20.11■□□□□ 0.81
SMIM18P0DKX4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.11■□□□□ 0.81
SMIM18P0DKX4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SMIM18P0DKX4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 DUX4L13-201ENST00000554103 1267 ntBASIC20.1■□□□□ 0.81
SMIM18P0DKX4 DUX4L15-201ENST00000611059 1267 ntBASIC20.1■□□□□ 0.81
SMIM18P0DKX4 DUX4L23-201ENST00000615195 1269 ntBASIC20.1■□□□□ 0.81
SMIM18P0DKX4 DUX4L24-201ENST00000617576 1269 ntBASIC20.1■□□□□ 0.81
SMIM18P0DKX4 DUX4L22-201ENST00000618238 1269 ntBASIC20.1■□□□□ 0.81
SMIM18P0DKX4 DUX4L20-201ENST00000619712 1269 ntBASIC20.1■□□□□ 0.81
SMIM18P0DKX4 DUX4L21-201ENST00000622058 1269 ntBASIC20.1■□□□□ 0.81
SMIM18P0DKX4 DUX4L10-201ENST00000622460 1267 ntBASIC20.1■□□□□ 0.81
SMIM18P0DKX4 DUX4L25-201ENST00000624915 1269 ntBASIC20.1■□□□□ 0.81
SMIM18P0DKX4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SMIM18P0DKX4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 AL157400.5-201ENST00000507624 621 ntBASIC20.09■□□□□ 0.81
SMIM18P0DKX4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SMIM18P0DKX4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMIM18P0DKX4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.08■□□□□ 0.81
SMIM18P0DKX4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
SMIM18P0DKX4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMIM18P0DKX4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMIM18P0DKX4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SMIM18P0DKX4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SMIM18P0DKX4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
SMIM18P0DKX4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.08■□□□□ 0.8
SMIM18P0DKX4 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.08■□□□□ 0.8
SMIM18P0DKX4 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SMIM18P0DKX4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms