Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RBP1P09455 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
RBP1P09455 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RBP1P09455 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RBP1P09455 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBP1P09455 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RBP1P09455 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RBP1P09455 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBP1P09455 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.66■■□□□ 1.06
RBP1P09455 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBP1P09455 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.66■■□□□ 1.06
RBP1P09455 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBP1P09455 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.66■■□□□ 1.06
RBP1P09455 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.66■■□□□ 1.06
RBP1P09455 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBP1P09455 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBP1P09455 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.66■■□□□ 1.06
RBP1P09455 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RBP1P09455 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.66■■□□□ 1.06
RBP1P09455 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.66■■□□□ 1.06
RBP1P09455 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RBP1P09455 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RBP1P09455 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.65■■□□□ 1.06
RBP1P09455 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RBP1P09455 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RBP1P09455 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
RBP1P09455 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RBP1P09455 AC010997.5-201ENST00000609182 354 ntBASIC21.65■■□□□ 1.06
RBP1P09455 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.65■■□□□ 1.06
RBP1P09455 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RBP1P09455 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RBP1P09455 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RBP1P09455 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RBP1P09455 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
RBP1P09455 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
RBP1P09455 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.06
RBP1P09455 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RBP1P09455 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.64■■□□□ 1.05
RBP1P09455 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.64■■□□□ 1.05
RBP1P09455 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RBP1P09455 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.64■■□□□ 1.05
RBP1P09455 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RBP1P09455 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RBP1P09455 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RBP1P09455 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
RBP1P09455 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RBP1P09455 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RBP1P09455 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RBP1P09455 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RBP1P09455 AC239859.2-201ENST00000444165 318 ntBASIC21.63■■□□□ 1.05
RBP1P09455 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RBP1P09455 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.63■■□□□ 1.05
RBP1P09455 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RBP1P09455 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.63■■□□□ 1.05
RBP1P09455 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RBP1P09455 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RBP1P09455 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RBP1P09455 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RBP1P09455 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.62■■□□□ 1.05
RBP1P09455 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RBP1P09455 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
RBP1P09455 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RBP1P09455 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.62■■□□□ 1.05
RBP1P09455 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.62■■□□□ 1.05
RBP1P09455 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RBP1P09455 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RBP1P09455 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RBP1P09455 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RBP1P09455 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RBP1P09455 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.61■■□□□ 1.05
RBP1P09455 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RBP1P09455 C17orf82-201ENST00000623772 1530 ntBASIC21.61■■□□□ 1.05
RBP1P09455 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RBP1P09455 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RBP1P09455 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.61■■□□□ 1.05
RBP1P09455 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RBP1P09455 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RBP1P09455 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.61■■□□□ 1.05
RBP1P09455 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RBP1P09455 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.61■■□□□ 1.05
RBP1P09455 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
RBP1P09455 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RBP1P09455 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RBP1P09455 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RBP1P09455 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RBP1P09455 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.6■■□□□ 1.05
RBP1P09455 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RBP1P09455 AC004687.1-201ENST00000579003 1625 ntBASIC21.6■■□□□ 1.05
RBP1P09455 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RBP1P09455 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.6■■□□□ 1.05
RBP1P09455 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.6■■□□□ 1.05
RBP1P09455 RARRES2P1-201ENST00000474487 481 ntBASIC21.6■■□□□ 1.05
RBP1P09455 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RBP1P09455 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RBP1P09455 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RBP1P09455 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RBP1P09455 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RBP1P09455 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RBP1P09455 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RBP1P09455 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms