Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRRM4A7MD48 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRRM4A7MD48 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SRRM4A7MD48 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRRM4A7MD48 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRRM4A7MD48 LINC01960-201ENST00000563759 1884 ntBASIC17.7■□□□□ 0.42
SRRM4A7MD48 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRRM4A7MD48 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRRM4A7MD48 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.7■□□□□ 0.42
SRRM4A7MD48 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.7■□□□□ 0.42
SRRM4A7MD48 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.7■□□□□ 0.42
SRRM4A7MD48 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SRRM4A7MD48 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.7■□□□□ 0.42
SRRM4A7MD48 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
SRRM4A7MD48 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRRM4A7MD48 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SRRM4A7MD48 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SRRM4A7MD48 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.69■□□□□ 0.42
SRRM4A7MD48 CLDN5-201ENST00000403084 2357 ntBASIC17.69■□□□□ 0.42
SRRM4A7MD48 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM4A7MD48 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM4A7MD48 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM4A7MD48 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM4A7MD48 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.69■□□□□ 0.42
SRRM4A7MD48 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SRRM4A7MD48 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SRRM4A7MD48 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.69■□□□□ 0.42
SRRM4A7MD48 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SRRM4A7MD48 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SRRM4A7MD48 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.68■□□□□ 0.42
SRRM4A7MD48 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 AL499627.2-201ENST00000606283 725 ntBASIC17.68■□□□□ 0.42
SRRM4A7MD48 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SRRM4A7MD48 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.68■□□□□ 0.42
SRRM4A7MD48 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SRRM4A7MD48 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.68■□□□□ 0.42
SRRM4A7MD48 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.67■□□□□ 0.42
SRRM4A7MD48 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.67■□□□□ 0.42
SRRM4A7MD48 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.67■□□□□ 0.42
SRRM4A7MD48 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SRRM4A7MD48 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM4A7MD48 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM4A7MD48 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
SRRM4A7MD48 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM4A7MD48 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SRRM4A7MD48 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM4A7MD48 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM4A7MD48 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.67■□□□□ 0.42
SRRM4A7MD48 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.67■□□□□ 0.42
SRRM4A7MD48 AL356740.2-201ENST00000601559 647 ntBASIC17.67■□□□□ 0.42
SRRM4A7MD48 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC17.67■□□□□ 0.42
SRRM4A7MD48 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.67■□□□□ 0.42
SRRM4A7MD48 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM4A7MD48 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SRRM4A7MD48 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.67■□□□□ 0.42
SRRM4A7MD48 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM4A7MD48 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM4A7MD48 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM4A7MD48 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM4A7MD48 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM4A7MD48 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.67■□□□□ 0.42
SRRM4A7MD48 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SRRM4A7MD48 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SRRM4A7MD48 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SRRM4A7MD48 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SRRM4A7MD48 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.66■□□□□ 0.42
SRRM4A7MD48 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 MIR3621-201ENST00000580529 85 ntBASIC17.66■□□□□ 0.42
SRRM4A7MD48 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.66■□□□□ 0.42
SRRM4A7MD48 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.66■□□□□ 0.42
SRRM4A7MD48 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SRRM4A7MD48 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.66■□□□□ 0.42
SRRM4A7MD48 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SRRM4A7MD48 AC092053.2-201ENST00000640557 1818 ntBASIC17.65■□□□□ 0.42
SRRM4A7MD48 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SRRM4A7MD48 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms