Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
LOC102724428A0A0B4J2F2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
LOC102724428A0A0B4J2F2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC28.38■■■□□ 2.13
LOC102724428A0A0B4J2F2 MIR663A-201ENST00000385250 93 ntBASIC28.38■■■□□ 2.13
LOC102724428A0A0B4J2F2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
LOC102724428A0A0B4J2F2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC28.38■■■□□ 2.13
LOC102724428A0A0B4J2F2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 TESC-206ENST00000541210 936 ntTSL 3 BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC28.37■■■□□ 2.13
LOC102724428A0A0B4J2F2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
LOC102724428A0A0B4J2F2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC28.36■■■□□ 2.13
LOC102724428A0A0B4J2F2 KRT18P11-201ENST00000435214 1283 ntBASIC28.36■■■□□ 2.13
LOC102724428A0A0B4J2F2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC28.36■■■□□ 2.13
LOC102724428A0A0B4J2F2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC28.36■■■□□ 2.13
LOC102724428A0A0B4J2F2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
LOC102724428A0A0B4J2F2 WT1-AS_3.1-201ENST00000613262 234 ntBASIC28.36■■■□□ 2.13
LOC102724428A0A0B4J2F2 ESRRAP2-201ENST00000418437 1549 ntBASIC28.36■■■□□ 2.13
LOC102724428A0A0B4J2F2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC28.36■■■□□ 2.13
LOC102724428A0A0B4J2F2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
LOC102724428A0A0B4J2F2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
LOC102724428A0A0B4J2F2 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
LOC102724428A0A0B4J2F2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
LOC102724428A0A0B4J2F2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
LOC102724428A0A0B4J2F2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
LOC102724428A0A0B4J2F2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC28.35■■■□□ 2.13
LOC102724428A0A0B4J2F2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC28.35■■■□□ 2.13
LOC102724428A0A0B4J2F2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
LOC102724428A0A0B4J2F2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC28.35■■■□□ 2.13
LOC102724428A0A0B4J2F2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC28.35■■■□□ 2.13
LOC102724428A0A0B4J2F2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
LOC102724428A0A0B4J2F2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
LOC102724428A0A0B4J2F2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 AC138932.3-201ENST00000567634 1902 ntBASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 AC010141.3-201ENST00000456659 717 ntBASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.34■■■□□ 2.13
LOC102724428A0A0B4J2F2 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
LOC102724428A0A0B4J2F2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
LOC102724428A0A0B4J2F2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
LOC102724428A0A0B4J2F2 GPX1P1-201ENST00000388829 606 ntBASIC28.33■■■□□ 2.13
LOC102724428A0A0B4J2F2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC28.33■■■□□ 2.13
LOC102724428A0A0B4J2F2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC28.33■■■□□ 2.13
LOC102724428A0A0B4J2F2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
LOC102724428A0A0B4J2F2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC28.31■■■□□ 2.12
LOC102724428A0A0B4J2F2 MDK-213ENST00000617138 635 ntTSL 2 BASIC28.31■■■□□ 2.12
LOC102724428A0A0B4J2F2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
LOC102724428A0A0B4J2F2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
LOC102724428A0A0B4J2F2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
LOC102724428A0A0B4J2F2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
LOC102724428A0A0B4J2F2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
LOC102724428A0A0B4J2F2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
LOC102724428A0A0B4J2F2 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC28.3■■■□□ 2.12
LOC102724428A0A0B4J2F2 AC079140.4-201ENST00000507448 529 ntBASIC28.3■■■□□ 2.12
LOC102724428A0A0B4J2F2 AC079630.1-202ENST00000618127 1840 ntBASIC28.29■■■□□ 2.12
LOC102724428A0A0B4J2F2 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
LOC102724428A0A0B4J2F2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
LOC102724428A0A0B4J2F2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC28.29■■■□□ 2.12
LOC102724428A0A0B4J2F2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC28.29■■■□□ 2.12
LOC102724428A0A0B4J2F2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC28.29■■■□□ 2.12
LOC102724428A0A0B4J2F2 MFSD11-216ENST00000590393 1141 ntBASIC28.29■■■□□ 2.12
LOC102724428A0A0B4J2F2 AC087239.1-201ENST00000622671 572 ntBASIC28.29■■■□□ 2.12
LOC102724428A0A0B4J2F2 TMEM191A-211ENST00000637163 1067 ntBASIC28.29■■■□□ 2.12
LOC102724428A0A0B4J2F2 GAMT-205ENST00000640762 751 ntTSL 5 BASIC28.29■■■□□ 2.12
LOC102724428A0A0B4J2F2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.28■■■□□ 2.12
LOC102724428A0A0B4J2F2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC28.28■■■□□ 2.12
LOC102724428A0A0B4J2F2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.28■■■□□ 2.12
LOC102724428A0A0B4J2F2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
LOC102724428A0A0B4J2F2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms