Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ZUFSP-202ENST00000368576 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SCN2BO60939 AL354861.3-201ENST00000600140 2412 ntBASIC12.45□□□□□ -0.42
SCN2BO60939 PIK3CD-202ENST00000377346 5203 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
SCN2BO60939 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
SCN2BO60939 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
SCN2BO60939 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC12.44□□□□□ -0.42
SCN2BO60939 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SCN2BO60939 TTI2-204ENST00000520636 1588 ntTSL 5 BASIC12.44□□□□□ -0.42
SCN2BO60939 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.44□□□□□ -0.42
SCN2BO60939 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC12.44□□□□□ -0.42
SCN2BO60939 CTBP2P8-201ENST00000422584 1330 ntBASIC12.44□□□□□ -0.42
SCN2BO60939 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.44□□□□□ -0.42
SCN2BO60939 AC106818.1-201ENST00000623223 3242 ntBASIC12.44□□□□□ -0.42
SCN2BO60939 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 AC243964.3-201ENST00000623022 2028 ntBASIC12.44□□□□□ -0.42
SCN2BO60939 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.44□□□□□ -0.42
SCN2BO60939 MAP2-201ENST00000199940 2241 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC12.44□□□□□ -0.42
SCN2BO60939 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC12.44□□□□□ -0.42
SCN2BO60939 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.44□□□□□ -0.42
SCN2BO60939 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC12.44□□□□□ -0.42
SCN2BO60939 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC12.44□□□□□ -0.42
SCN2BO60939 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC12.44□□□□□ -0.42
SCN2BO60939 RN7SL769P-201ENST00000469386 295 ntBASIC12.44□□□□□ -0.42
SCN2BO60939 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
SCN2BO60939 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC12.44□□□□□ -0.42
SCN2BO60939 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.44□□□□□ -0.42
SCN2BO60939 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC12.44□□□□□ -0.42
SCN2BO60939 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 AC007881.3-201ENST00000608897 607 ntBASIC12.44□□□□□ -0.42
SCN2BO60939 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC12.44□□□□□ -0.42
SCN2BO60939 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SCN2BO60939 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 IGF2BP2-204ENST00000457616 3426 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
SCN2BO60939 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC12.44□□□□□ -0.42
SCN2BO60939 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 AC009093.9-201ENST00000566038 1611 ntBASIC12.44□□□□□ -0.42
SCN2BO60939 PAM-203ENST00000346918 3302 ntTSL 5 BASIC12.44□□□□□ -0.42
SCN2BO60939 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SCN2BO60939 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SCN2BO60939 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SCN2BO60939 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC12.43□□□□□ -0.42
SCN2BO60939 ZNF106-205ENST00000565611 5081 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 C5orf15-201ENST00000231512 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SCN2BO60939 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC12.43□□□□□ -0.42
SCN2BO60939 DZANK1-201ENST00000262547 3498 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
SCN2BO60939 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC12.43□□□□□ -0.42
SCN2BO60939 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC12.43□□□□□ -0.42
SCN2BO60939 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SCN2BO60939 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC12.43□□□□□ -0.42
SCN2BO60939 RN7SKP255-201ENST00000363442 313 ntBASIC12.43□□□□□ -0.42
SCN2BO60939 RN7SKP203-201ENST00000363618 332 ntBASIC12.43□□□□□ -0.42
SCN2BO60939 RN7SKP71-201ENST00000364558 318 ntBASIC12.43□□□□□ -0.42
SCN2BO60939 7SK.1-201ENST00000365328 331 ntBASIC12.43□□□□□ -0.42
SCN2BO60939 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.43□□□□□ -0.42
SCN2BO60939 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 OR2T32P-201ENST00000403423 963 ntBASIC12.43□□□□□ -0.42
SCN2BO60939 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
SCN2BO60939 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 MTHFD2P7-201ENST00000483867 983 ntBASIC12.43□□□□□ -0.42
SCN2BO60939 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC12.43□□□□□ -0.42
SCN2BO60939 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC12.43□□□□□ -0.42
SCN2BO60939 EXTL3-AS1-204ENST00000523789 543 ntTSL 2 BASIC12.43□□□□□ -0.42
SCN2BO60939 AP000920.1-201ENST00000531824 344 ntBASIC12.43□□□□□ -0.42
SCN2BO60939 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms