Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SLC47A1-201ENST00000270570 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 STRADA-202ENST00000336174 2255 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC1A1P43005 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SLC1A1P43005 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC1A1P43005 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC1A1P43005 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.83□□□□□ -0.2
SLC1A1P43005 HPGD-203ENST00000422112 805 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC1A1P43005 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC1A1P43005 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC1A1P43005 UPF3AP2-201ENST00000457924 1132 ntBASIC13.83□□□□□ -0.2
SLC1A1P43005 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC13.83□□□□□ -0.2
SLC1A1P43005 FAM187B2P-201ENST00000577135 713 ntBASIC13.83□□□□□ -0.2
SLC1A1P43005 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC1A1P43005 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC1A1P43005 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC1A1P43005 AC005041.3-201ENST00000606287 649 ntBASIC13.83□□□□□ -0.2
SLC1A1P43005 ZDHHC4-202ENST00000396706 1942 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SLC1A1P43005 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SLC1A1P43005 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC1A1P43005 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 FAM90A11P-201ENST00000518378 2218 ntBASIC13.83□□□□□ -0.2
SLC1A1P43005 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC1A1P43005 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC1A1P43005 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC1A1P43005 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC13.82□□□□□ -0.2
SLC1A1P43005 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC13.82□□□□□ -0.2
SLC1A1P43005 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 FAM95B1-212ENST00000592873 4692 ntBASIC13.82□□□□□ -0.2
SLC1A1P43005 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC13.82□□□□□ -0.2
SLC1A1P43005 AC009549.1-201ENST00000603468 1686 ntBASIC13.82□□□□□ -0.2
SLC1A1P43005 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC13.82□□□□□ -0.2
SLC1A1P43005 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC1A1P43005 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC1A1P43005 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SLC1A1P43005 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 C16orf78-201ENST00000299191 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC1A1P43005 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC1A1P43005 AP000920.1-201ENST00000531824 344 ntBASIC13.82□□□□□ -0.2
SLC1A1P43005 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.82□□□□□ -0.2
SLC1A1P43005 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SLC1A1P43005 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC13.82□□□□□ -0.2
SLC1A1P43005 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC13.82□□□□□ -0.2
SLC1A1P43005 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.82□□□□□ -0.2
SLC1A1P43005 AL592295.4-201ENST00000636161 997 ntTSL 4 BASIC13.82□□□□□ -0.2
SLC1A1P43005 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SLC1A1P43005 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SLC1A1P43005 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SLC1A1P43005 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
SLC1A1P43005 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.82□□□□□ -0.2
SLC1A1P43005 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC1A1P43005 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SLC1A1P43005 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SLC1A1P43005 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.82□□□□□ -0.2
SLC1A1P43005 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SLC1A1P43005 CD33-201ENST00000262262 1444 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC13.81□□□□□ -0.2
SLC1A1P43005 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC13.81□□□□□ -0.2
SLC1A1P43005 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SLC1A1P43005 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC13.81□□□□□ -0.2
SLC1A1P43005 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SLC1A1P43005 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SLC1A1P43005 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SLC1A1P43005 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC13.81□□□□□ -0.2
SLC1A1P43005 FAM21EP-201ENST00000417804 985 ntBASIC13.81□□□□□ -0.2
SLC1A1P43005 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC1A1P43005 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.81□□□□□ -0.2
SLC1A1P43005 EEF1DP6-201ENST00000449232 372 ntBASIC13.81□□□□□ -0.2
SLC1A1P43005 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC13.81□□□□□ -0.2
SLC1A1P43005 MTHFD2P7-201ENST00000483867 983 ntBASIC13.81□□□□□ -0.2
SLC1A1P43005 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC13.81□□□□□ -0.2
SLC1A1P43005 IGLVI-63-201ENST00000524184 384 ntBASIC13.81□□□□□ -0.2
SLC1A1P43005 BAK1P2-201ENST00000532665 631 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms