Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 BRWD1P1-201ENST00000401091 371 ntBASIC10.78□□□□□ -0.68
RAB40CQ96S21 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 CFL1-212ENST00000531413 636 ntTSL 3 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 EID1-202ENST00000560490 584 ntTSL 3 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 AC007663.3-201ENST00000609632 465 ntBASIC10.78□□□□□ -0.68
RAB40CQ96S21 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 AOC2-202ENST00000452774 2572 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 ZNF831-203ENST00000637017 10953 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 ARHGEF9-205ENST00000437457 3758 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 IGSF9-201ENST00000361509 3996 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 ESPNL-203ENST00000409506 3610 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB40CQ96S21 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 CRHR2-201ENST00000341843 3131 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB40CQ96S21 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
RAB40CQ96S21 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
RAB40CQ96S21 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
RAB40CQ96S21 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
RAB40CQ96S21 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
RAB40CQ96S21 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
RAB40CQ96S21 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
RAB40CQ96S21 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
RAB40CQ96S21 AC011511.5-201ENST00000589379 3219 ntBASIC10.77□□□□□ -0.68
RAB40CQ96S21 NRF1-201ENST00000223190 2424 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
RAB40CQ96S21 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
RAB40CQ96S21 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
RAB40CQ96S21 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
RAB40CQ96S21 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
RAB40CQ96S21 C10orf90-201ENST00000284694 3076 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
RAB40CQ96S21 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 TBC1D3P1-201ENST00000590047 1693 ntBASIC10.77□□□□□ -0.69
RAB40CQ96S21 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 PUDP-201ENST00000381077 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 ELK2AP-201ENST00000392510 1007 ntBASIC10.77□□□□□ -0.69
RAB40CQ96S21 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 AC073869.2-201ENST00000417338 1026 ntBASIC10.77□□□□□ -0.69
RAB40CQ96S21 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 NAGK-204ENST00000443872 878 ntTSL 3 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 AL353637.1-201ENST00000451571 732 ntBASIC10.77□□□□□ -0.69
RAB40CQ96S21 AL591846.1-201ENST00000451736 433 ntBASIC10.77□□□□□ -0.69
RAB40CQ96S21 AC104073.2-201ENST00000453737 312 ntBASIC10.77□□□□□ -0.69
RAB40CQ96S21 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 RN7SL788P-201ENST00000460504 316 ntBASIC10.77□□□□□ -0.69
RAB40CQ96S21 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 CD74-212ENST00000524315 584 ntTSL 5 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 AP003170.2-201ENST00000544730 786 ntBASIC10.77□□□□□ -0.69
RAB40CQ96S21 AC145285.5-201ENST00000562217 361 ntBASIC10.77□□□□□ -0.69
RAB40CQ96S21 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms