Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA9Q9Y5G4 CCDC92B-201ENST00000575506 885 ntBASIC20.63■□□□□ 0.89
PCDHGA9Q9Y5G4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDHGA9Q9Y5G4 MIR6084-201ENST00000622012 110 ntBASIC20.63■□□□□ 0.89
PCDHGA9Q9Y5G4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA9Q9Y5G4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDHGA9Q9Y5G4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PCDHGA9Q9Y5G4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDHGA9Q9Y5G4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDHGA9Q9Y5G4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PCDHGA9Q9Y5G4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA9Q9Y5G4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.62■□□□□ 0.89
PCDHGA9Q9Y5G4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA9Q9Y5G4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.62■□□□□ 0.89
PCDHGA9Q9Y5G4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA9Q9Y5G4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDHGA9Q9Y5G4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
PCDHGA9Q9Y5G4 OR2I1P-207ENST00000453522 948 ntBASIC20.62■□□□□ 0.89
PCDHGA9Q9Y5G4 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA9Q9Y5G4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PCDHGA9Q9Y5G4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDHGA9Q9Y5G4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDHGA9Q9Y5G4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA9Q9Y5G4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA9Q9Y5G4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA9Q9Y5G4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA9Q9Y5G4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PCDHGA9Q9Y5G4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA9Q9Y5G4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGA9Q9Y5G4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PCDHGA9Q9Y5G4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA9Q9Y5G4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDHGA9Q9Y5G4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDHGA9Q9Y5G4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA9Q9Y5G4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDHGA9Q9Y5G4 FP325331.1-202ENST00000623531 1380 ntBASIC20.6■□□□□ 0.89
PCDHGA9Q9Y5G4 LINC02228-203ENST00000641970 1355 ntBASIC20.6■□□□□ 0.89
PCDHGA9Q9Y5G4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA9Q9Y5G4 TERF1P2-201ENST00000583350 1212 ntBASIC20.6■□□□□ 0.89
PCDHGA9Q9Y5G4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.6■□□□□ 0.89
PCDHGA9Q9Y5G4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA9Q9Y5G4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDHGA9Q9Y5G4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 AC004911.1-201ENST00000416316 871 ntBASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 KRT18P14-201ENST00000534205 1250 ntBASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 AC079834.2-201ENST00000609776 1949 ntBASIC20.59■□□□□ 0.89
PCDHGA9Q9Y5G4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 NTF6G-201ENST00000591094 616 ntBASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.58■□□□□ 0.89
PCDHGA9Q9Y5G4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PCDHGA9Q9Y5G4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
PCDHGA9Q9Y5G4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
PCDHGA9Q9Y5G4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 AP005435.1-201ENST00000529293 1178 ntBASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 DUX4L4-201ENST00000566884 1269 ntBASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PCDHGA9Q9Y5G4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PCDHGA9Q9Y5G4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms