Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
SSX2IPQ9Y2D8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
SSX2IPQ9Y2D8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.67■■□□□ 1.38
SSX2IPQ9Y2D8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SSX2IPQ9Y2D8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
SSX2IPQ9Y2D8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.67■■□□□ 1.38
SSX2IPQ9Y2D8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 RARRES2P11-201ENST00000635158 484 ntBASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SSX2IPQ9Y2D8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SSX2IPQ9Y2D8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.65■■□□□ 1.38
SSX2IPQ9Y2D8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SSX2IPQ9Y2D8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SSX2IPQ9Y2D8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SSX2IPQ9Y2D8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SSX2IPQ9Y2D8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
SSX2IPQ9Y2D8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
SSX2IPQ9Y2D8 CCDC92B-201ENST00000575506 885 ntBASIC23.65■■□□□ 1.38
SSX2IPQ9Y2D8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SSX2IPQ9Y2D8 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.64■■□□□ 1.38
SSX2IPQ9Y2D8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SSX2IPQ9Y2D8 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
SSX2IPQ9Y2D8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
SSX2IPQ9Y2D8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
SSX2IPQ9Y2D8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SSX2IPQ9Y2D8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.64■■□□□ 1.37
SSX2IPQ9Y2D8 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.64■■□□□ 1.37
SSX2IPQ9Y2D8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SSX2IPQ9Y2D8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
SSX2IPQ9Y2D8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.64■■□□□ 1.37
SSX2IPQ9Y2D8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
SSX2IPQ9Y2D8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.63■■□□□ 1.37
SSX2IPQ9Y2D8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SSX2IPQ9Y2D8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SSX2IPQ9Y2D8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SSX2IPQ9Y2D8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
SSX2IPQ9Y2D8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SSX2IPQ9Y2D8 KRT18P14-201ENST00000534205 1250 ntBASIC23.63■■□□□ 1.37
SSX2IPQ9Y2D8 IKBKGP1-201ENST00000612193 1073 ntBASIC23.63■■□□□ 1.37
SSX2IPQ9Y2D8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC23.63■■□□□ 1.37
SSX2IPQ9Y2D8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SSX2IPQ9Y2D8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
SSX2IPQ9Y2D8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 AC090192.1-201ENST00000517740 490 ntBASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 TERF1P2-201ENST00000583350 1212 ntBASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SSX2IPQ9Y2D8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 AC105233.4-201ENST00000642045 216 ntBASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
SSX2IPQ9Y2D8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC23.6■■□□□ 1.37
SSX2IPQ9Y2D8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SSX2IPQ9Y2D8 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SSX2IPQ9Y2D8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SSX2IPQ9Y2D8 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.6■■□□□ 1.37
SSX2IPQ9Y2D8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SSX2IPQ9Y2D8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.6■■□□□ 1.37
SSX2IPQ9Y2D8 NTF6G-201ENST00000591094 616 ntBASIC23.6■■□□□ 1.37
SSX2IPQ9Y2D8 AC138932.3-201ENST00000567634 1902 ntBASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms