Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VSX1Q9NZR4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VSX1Q9NZR4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
VSX1Q9NZR4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
VSX1Q9NZR4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
VSX1Q9NZR4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.66■□□□□ 0.74
VSX1Q9NZR4 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
VSX1Q9NZR4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
VSX1Q9NZR4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.65■□□□□ 0.74
VSX1Q9NZR4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.65■□□□□ 0.74
VSX1Q9NZR4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
VSX1Q9NZR4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.64■□□□□ 0.74
VSX1Q9NZR4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VSX1Q9NZR4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VSX1Q9NZR4 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VSX1Q9NZR4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.64■□□□□ 0.73
VSX1Q9NZR4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VSX1Q9NZR4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VSX1Q9NZR4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VSX1Q9NZR4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VSX1Q9NZR4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
VSX1Q9NZR4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VSX1Q9NZR4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.64■□□□□ 0.73
VSX1Q9NZR4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 AL035685.1-201ENST00000636663 812 ntBASIC19.63■□□□□ 0.73
VSX1Q9NZR4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VSX1Q9NZR4 AC139530.1-201ENST00000575312 1977 ntBASIC19.63■□□□□ 0.73
VSX1Q9NZR4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VSX1Q9NZR4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VSX1Q9NZR4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.62■□□□□ 0.73
VSX1Q9NZR4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VSX1Q9NZR4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VSX1Q9NZR4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VSX1Q9NZR4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.62■□□□□ 0.73
VSX1Q9NZR4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VSX1Q9NZR4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VSX1Q9NZR4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VSX1Q9NZR4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VSX1Q9NZR4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VSX1Q9NZR4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VSX1Q9NZR4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
VSX1Q9NZR4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSX1Q9NZR4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.6■□□□□ 0.73
VSX1Q9NZR4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSX1Q9NZR4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSX1Q9NZR4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSX1Q9NZR4 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.6■□□□□ 0.73
VSX1Q9NZR4 AC080038.3-201ENST00000623346 1952 ntBASIC19.6■□□□□ 0.73
VSX1Q9NZR4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSX1Q9NZR4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSX1Q9NZR4 LINC01960-201ENST00000563759 1884 ntBASIC19.6■□□□□ 0.73
VSX1Q9NZR4 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
VSX1Q9NZR4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.6■□□□□ 0.73
VSX1Q9NZR4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VSX1Q9NZR4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.59■□□□□ 0.73
VSX1Q9NZR4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.59■□□□□ 0.73
VSX1Q9NZR4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
VSX1Q9NZR4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.59■□□□□ 0.73
VSX1Q9NZR4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
VSX1Q9NZR4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
VSX1Q9NZR4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms