Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 KRT18P60-201ENST00000312876 1297 ntBASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
C12orf4Q9NQ89 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
C12orf4Q9NQ89 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
C12orf4Q9NQ89 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
C12orf4Q9NQ89 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.01■□□□□ 0.63
C12orf4Q9NQ89 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.01■□□□□ 0.63
C12orf4Q9NQ89 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
C12orf4Q9NQ89 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.01■□□□□ 0.63
C12orf4Q9NQ89 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
C12orf4Q9NQ89 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
C12orf4Q9NQ89 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
C12orf4Q9NQ89 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
C12orf4Q9NQ89 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
C12orf4Q9NQ89 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19■□□□□ 0.63
C12orf4Q9NQ89 AC139795.1-202ENST00000500444 432 ntBASIC19■□□□□ 0.63
C12orf4Q9NQ89 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 HSD17B1P1-201ENST00000590052 955 ntBASIC19■□□□□ 0.63
C12orf4Q9NQ89 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
C12orf4Q9NQ89 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
C12orf4Q9NQ89 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.99■□□□□ 0.63
C12orf4Q9NQ89 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
C12orf4Q9NQ89 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
C12orf4Q9NQ89 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
C12orf4Q9NQ89 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms