Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF556Q9HAH1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ZNF556Q9HAH1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
ZNF556Q9HAH1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF556Q9HAH1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF556Q9HAH1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ZNF556Q9HAH1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF556Q9HAH1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.37■□□□□ 0.85
ZNF556Q9HAH1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF556Q9HAH1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.37■□□□□ 0.85
ZNF556Q9HAH1 AC129492.7-201ENST00000622992 756 ntBASIC20.37■□□□□ 0.85
ZNF556Q9HAH1 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 AC139795.1-202ENST00000500444 432 ntBASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF556Q9HAH1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF556Q9HAH1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF556Q9HAH1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF556Q9HAH1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF556Q9HAH1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF556Q9HAH1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.35■□□□□ 0.85
ZNF556Q9HAH1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ZNF556Q9HAH1 FBXW4P1-201ENST00000426721 2239 ntBASIC20.35■□□□□ 0.85
ZNF556Q9HAH1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF556Q9HAH1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ZNF556Q9HAH1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ZNF556Q9HAH1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ZNF556Q9HAH1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 AC080038.3-201ENST00000623346 1952 ntBASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 AL137060.1-201ENST00000618151 2648 ntBASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 AC004448.1-201ENST00000458332 883 ntBASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF556Q9HAH1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ZNF556Q9HAH1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF556Q9HAH1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.33■□□□□ 0.85
ZNF556Q9HAH1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF556Q9HAH1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF556Q9HAH1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF556Q9HAH1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF556Q9HAH1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.33■□□□□ 0.85
ZNF556Q9HAH1 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.33■□□□□ 0.84
ZNF556Q9HAH1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF556Q9HAH1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.33■□□□□ 0.84
ZNF556Q9HAH1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF556Q9HAH1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ZNF556Q9HAH1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF556Q9HAH1 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ZNF556Q9HAH1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
ZNF556Q9HAH1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF556Q9HAH1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF556Q9HAH1 AC120024.1-201ENST00000562672 995 ntBASIC20.32■□□□□ 0.84
ZNF556Q9HAH1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF556Q9HAH1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.32■□□□□ 0.84
ZNF556Q9HAH1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF556Q9HAH1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF556Q9HAH1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF556Q9HAH1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF556Q9HAH1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNF556Q9HAH1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNF556Q9HAH1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNF556Q9HAH1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNF556Q9HAH1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF556Q9HAH1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNF556Q9HAH1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF556Q9HAH1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF556Q9HAH1 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.31■□□□□ 0.84
ZNF556Q9HAH1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
ZNF556Q9HAH1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms