Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CHMP4BQ9H444 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.81■■■□□ 2.04
CHMP4BQ9H444 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CHMP4BQ9H444 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC27.81■■■□□ 2.04
CHMP4BQ9H444 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
CHMP4BQ9H444 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
CHMP4BQ9H444 GTSE1-AS1-202ENST00000623117 1518 ntBASIC27.81■■■□□ 2.04
CHMP4BQ9H444 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.81■■■□□ 2.04
CHMP4BQ9H444 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.81■■■□□ 2.04
CHMP4BQ9H444 AC242852.2-201ENST00000615738 1807 ntBASIC27.81■■■□□ 2.04
CHMP4BQ9H444 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CHMP4BQ9H444 RPP21-222ENST00000433076 577 ntTSL 2 BASIC27.8■■■□□ 2.04
CHMP4BQ9H444 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CHMP4BQ9H444 AL512631.2-201ENST00000604634 923 ntBASIC27.8■■■□□ 2.04
CHMP4BQ9H444 ECEL1P1-201ENST00000373592 1742 ntBASIC27.8■■■□□ 2.04
CHMP4BQ9H444 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
CHMP4BQ9H444 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHMP4BQ9H444 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
CHMP4BQ9H444 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC27.79■■■□□ 2.04
CHMP4BQ9H444 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHMP4BQ9H444 LINC01960-201ENST00000563759 1884 ntBASIC27.79■■■□□ 2.04
CHMP4BQ9H444 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHMP4BQ9H444 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.79■■■□□ 2.04
CHMP4BQ9H444 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
CHMP4BQ9H444 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
CHMP4BQ9H444 AC099791.2-201ENST00000605725 427 ntBASIC27.79■■■□□ 2.04
CHMP4BQ9H444 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 AC087742.1-201ENST00000575880 1738 ntBASIC27.78■■■□□ 2.04
CHMP4BQ9H444 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 RASSF1-AS1-201ENST00000629828 790 ntBASIC27.78■■■□□ 2.04
CHMP4BQ9H444 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC27.78■■■□□ 2.04
CHMP4BQ9H444 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
CHMP4BQ9H444 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC27.77■■■□□ 2.04
CHMP4BQ9H444 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC27.77■■■□□ 2.04
CHMP4BQ9H444 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.77■■■□□ 2.04
CHMP4BQ9H444 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
CHMP4BQ9H444 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CHMP4BQ9H444 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
CHMP4BQ9H444 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.76■■■□□ 2.03
CHMP4BQ9H444 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC27.76■■■□□ 2.03
CHMP4BQ9H444 pRNA.6-201ENST00000610482 90 ntBASIC27.76■■■□□ 2.03
CHMP4BQ9H444 pRNA.5-201ENST00000612139 90 ntBASIC27.76■■■□□ 2.03
CHMP4BQ9H444 pRNA.11-201ENST00000618423 90 ntBASIC27.76■■■□□ 2.03
CHMP4BQ9H444 pRNA.13-201ENST00000619112 90 ntBASIC27.76■■■□□ 2.03
CHMP4BQ9H444 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC27.76■■■□□ 2.03
CHMP4BQ9H444 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC27.76■■■□□ 2.03
CHMP4BQ9H444 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
CHMP4BQ9H444 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.76■■■□□ 2.03
CHMP4BQ9H444 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC27.75■■■□□ 2.03
CHMP4BQ9H444 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHMP4BQ9H444 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
CHMP4BQ9H444 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHMP4BQ9H444 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
CHMP4BQ9H444 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
CHMP4BQ9H444 DUX4L19-201ENST00000557448 1267 ntBASIC27.75■■■□□ 2.03
CHMP4BQ9H444 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC27.75■■■□□ 2.03
CHMP4BQ9H444 AC133637.1-201ENST00000624115 1537 ntBASIC27.75■■■□□ 2.03
CHMP4BQ9H444 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC27.75■■■□□ 2.03
CHMP4BQ9H444 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
CHMP4BQ9H444 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
CHMP4BQ9H444 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
CHMP4BQ9H444 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
CHMP4BQ9H444 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC27.74■■■□□ 2.03
CHMP4BQ9H444 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC27.74■■■□□ 2.03
CHMP4BQ9H444 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
CHMP4BQ9H444 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHMP4BQ9H444 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHMP4BQ9H444 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CHMP4BQ9H444 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHMP4BQ9H444 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC27.72■■■□□ 2.03
CHMP4BQ9H444 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
CHMP4BQ9H444 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
CHMP4BQ9H444 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC27.72■■■□□ 2.03
CHMP4BQ9H444 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
CHMP4BQ9H444 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
CHMP4BQ9H444 AC006455.2-201ENST00000429931 906 ntBASIC27.71■■■□□ 2.03
CHMP4BQ9H444 AL138724.1-201ENST00000606771 1088 ntBASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms