Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NUCKS1Q9H1E3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
NUCKS1Q9H1E3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
NUCKS1Q9H1E3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NUCKS1Q9H1E3 AC087742.1-201ENST00000575880 1738 ntBASIC23.9■■□□□ 1.42
NUCKS1Q9H1E3 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
NUCKS1Q9H1E3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NUCKS1Q9H1E3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
NUCKS1Q9H1E3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.89■■□□□ 1.41
NUCKS1Q9H1E3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NUCKS1Q9H1E3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
NUCKS1Q9H1E3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.89■■□□□ 1.41
NUCKS1Q9H1E3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.89■■□□□ 1.41
NUCKS1Q9H1E3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.89■■□□□ 1.41
NUCKS1Q9H1E3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
NUCKS1Q9H1E3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.88■■□□□ 1.41
NUCKS1Q9H1E3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
NUCKS1Q9H1E3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NUCKS1Q9H1E3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.88■■□□□ 1.41
NUCKS1Q9H1E3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NUCKS1Q9H1E3 MTDHP2-201ENST00000601468 714 ntBASIC23.88■■□□□ 1.41
NUCKS1Q9H1E3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NUCKS1Q9H1E3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.88■■□□□ 1.41
NUCKS1Q9H1E3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NUCKS1Q9H1E3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
NUCKS1Q9H1E3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NUCKS1Q9H1E3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
NUCKS1Q9H1E3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
NUCKS1Q9H1E3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.87■■□□□ 1.41
NUCKS1Q9H1E3 AC010997.5-201ENST00000609182 354 ntBASIC23.87■■□□□ 1.41
NUCKS1Q9H1E3 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
NUCKS1Q9H1E3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NUCKS1Q9H1E3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NUCKS1Q9H1E3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NUCKS1Q9H1E3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
NUCKS1Q9H1E3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.87■■□□□ 1.41
NUCKS1Q9H1E3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NUCKS1Q9H1E3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
NUCKS1Q9H1E3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 AC131212.1-201ENST00000613771 668 ntBASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NUCKS1Q9H1E3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
NUCKS1Q9H1E3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NUCKS1Q9H1E3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.85■■□□□ 1.41
NUCKS1Q9H1E3 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NUCKS1Q9H1E3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NUCKS1Q9H1E3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NUCKS1Q9H1E3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.85■■□□□ 1.41
NUCKS1Q9H1E3 DUX4L4-201ENST00000566884 1269 ntBASIC23.85■■□□□ 1.41
NUCKS1Q9H1E3 AC009086.3-201ENST00000623486 1008 ntBASIC23.85■■□□□ 1.41
NUCKS1Q9H1E3 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NUCKS1Q9H1E3 C11orf96-202ENST00000528572 1834 ntBASIC23.84■■□□□ 1.41
NUCKS1Q9H1E3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NUCKS1Q9H1E3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
NUCKS1Q9H1E3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
NUCKS1Q9H1E3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.84■■□□□ 1.41
NUCKS1Q9H1E3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.84■■□□□ 1.41
NUCKS1Q9H1E3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.84■■□□□ 1.41
NUCKS1Q9H1E3 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
NUCKS1Q9H1E3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
NUCKS1Q9H1E3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NUCKS1Q9H1E3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.82■■□□□ 1.4
NUCKS1Q9H1E3 AC080038.3-201ENST00000623346 1952 ntBASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms