Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LSG1Q9H089 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.48■■□□□ 1.83
LSG1Q9H089 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
LSG1Q9H089 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
LSG1Q9H089 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
LSG1Q9H089 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
LSG1Q9H089 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.47■■□□□ 1.83
LSG1Q9H089 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
LSG1Q9H089 AC099791.2-201ENST00000605725 427 ntBASIC26.47■■□□□ 1.83
LSG1Q9H089 AC241377.3-202ENST00000626088 1088 ntBASIC26.47■■□□□ 1.83
LSG1Q9H089 AC241585.3-202ENST00000628937 1088 ntBASIC26.47■■□□□ 1.83
LSG1Q9H089 AC245100.8-202ENST00000629247 1058 ntBASIC26.47■■□□□ 1.83
LSG1Q9H089 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC26.47■■□□□ 1.83
LSG1Q9H089 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LSG1Q9H089 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC26.46■■□□□ 1.83
LSG1Q9H089 AC080038.3-201ENST00000623346 1952 ntBASIC26.46■■□□□ 1.83
LSG1Q9H089 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LSG1Q9H089 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.46■■□□□ 1.83
LSG1Q9H089 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
LSG1Q9H089 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LSG1Q9H089 LINC00526-201ENST00000581067 1875 ntBASIC26.46■■□□□ 1.83
LSG1Q9H089 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
LSG1Q9H089 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.46■■□□□ 1.83
LSG1Q9H089 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LSG1Q9H089 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LSG1Q9H089 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
LSG1Q9H089 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LSG1Q9H089 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
LSG1Q9H089 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
LSG1Q9H089 MIR4466-201ENST00000606121 54 ntBASIC26.45■■□□□ 1.82
LSG1Q9H089 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.82
LSG1Q9H089 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
LSG1Q9H089 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.45■■□□□ 1.82
LSG1Q9H089 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
LSG1Q9H089 AC139530.1-201ENST00000575312 1977 ntBASIC26.44■■□□□ 1.82
LSG1Q9H089 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.44■■□□□ 1.82
LSG1Q9H089 RPP21-222ENST00000433076 577 ntTSL 2 BASIC26.44■■□□□ 1.82
LSG1Q9H089 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.44■■□□□ 1.82
LSG1Q9H089 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.44■■□□□ 1.82
LSG1Q9H089 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
LSG1Q9H089 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.44■■□□□ 1.82
LSG1Q9H089 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
LSG1Q9H089 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
LSG1Q9H089 AC242852.2-201ENST00000615738 1807 ntBASIC26.44■■□□□ 1.82
LSG1Q9H089 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LSG1Q9H089 LINC01960-201ENST00000563759 1884 ntBASIC26.43■■□□□ 1.82
LSG1Q9H089 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.43■■□□□ 1.82
LSG1Q9H089 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.43■■□□□ 1.82
LSG1Q9H089 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
LSG1Q9H089 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.43■■□□□ 1.82
LSG1Q9H089 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC26.43■■□□□ 1.82
LSG1Q9H089 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC26.43■■□□□ 1.82
LSG1Q9H089 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC26.43■■□□□ 1.82
LSG1Q9H089 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
LSG1Q9H089 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
LSG1Q9H089 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.42■■□□□ 1.82
LSG1Q9H089 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LSG1Q9H089 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.42■■□□□ 1.82
LSG1Q9H089 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
LSG1Q9H089 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC26.42■■□□□ 1.82
LSG1Q9H089 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC26.42■■□□□ 1.82
LSG1Q9H089 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.42■■□□□ 1.82
LSG1Q9H089 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LSG1Q9H089 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LSG1Q9H089 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
LSG1Q9H089 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LSG1Q9H089 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LSG1Q9H089 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
LSG1Q9H089 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
LSG1Q9H089 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LSG1Q9H089 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
LSG1Q9H089 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
LSG1Q9H089 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.41■■□□□ 1.82
LSG1Q9H089 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.41■■□□□ 1.82
LSG1Q9H089 pRNA.6-201ENST00000610482 90 ntBASIC26.41■■□□□ 1.82
LSG1Q9H089 pRNA.5-201ENST00000612139 90 ntBASIC26.41■■□□□ 1.82
LSG1Q9H089 pRNA.11-201ENST00000618423 90 ntBASIC26.41■■□□□ 1.82
LSG1Q9H089 pRNA.13-201ENST00000619112 90 ntBASIC26.41■■□□□ 1.82
LSG1Q9H089 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.41■■□□□ 1.82
LSG1Q9H089 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.41■■□□□ 1.82
LSG1Q9H089 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
LSG1Q9H089 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
LSG1Q9H089 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LSG1Q9H089 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
LSG1Q9H089 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
LSG1Q9H089 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
LSG1Q9H089 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
LSG1Q9H089 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.4■■□□□ 1.82
LSG1Q9H089 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
LSG1Q9H089 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LSG1Q9H089 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
LSG1Q9H089 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.4■■□□□ 1.82
LSG1Q9H089 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.4■■□□□ 1.82
LSG1Q9H089 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
LSG1Q9H089 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.4■■□□□ 1.82
LSG1Q9H089 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
LSG1Q9H089 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
LSG1Q9H089 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
LSG1Q9H089 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
LSG1Q9H089 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms