Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPG11Q96JI7 GUSBP6-202ENST00000438529 1198 ntBASIC18.88■□□□□ 0.61
SPG11Q96JI7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.88■□□□□ 0.61
SPG11Q96JI7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SPG11Q96JI7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.88■□□□□ 0.61
SPG11Q96JI7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPG11Q96JI7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.88■□□□□ 0.61
SPG11Q96JI7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPG11Q96JI7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SPG11Q96JI7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPG11Q96JI7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SPG11Q96JI7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.87■□□□□ 0.61
SPG11Q96JI7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPG11Q96JI7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPG11Q96JI7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.87■□□□□ 0.61
SPG11Q96JI7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPG11Q96JI7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPG11Q96JI7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPG11Q96JI7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.86■□□□□ 0.61
SPG11Q96JI7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPG11Q96JI7 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.86■□□□□ 0.61
SPG11Q96JI7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.86■□□□□ 0.61
SPG11Q96JI7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPG11Q96JI7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPG11Q96JI7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.86■□□□□ 0.61
SPG11Q96JI7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.86■□□□□ 0.61
SPG11Q96JI7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPG11Q96JI7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SPG11Q96JI7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.86■□□□□ 0.61
SPG11Q96JI7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPG11Q96JI7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPG11Q96JI7 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPG11Q96JI7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SPG11Q96JI7 AC069152.1-201ENST00000438030 544 ntBASIC18.85■□□□□ 0.61
SPG11Q96JI7 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPG11Q96JI7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
SPG11Q96JI7 AL050303.2-201ENST00000619798 666 ntBASIC18.85■□□□□ 0.61
SPG11Q96JI7 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SPG11Q96JI7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.85■□□□□ 0.61
SPG11Q96JI7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
SPG11Q96JI7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPG11Q96JI7 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.85■□□□□ 0.61
SPG11Q96JI7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.85■□□□□ 0.61
SPG11Q96JI7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
SPG11Q96JI7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPG11Q96JI7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPG11Q96JI7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.84■□□□□ 0.61
SPG11Q96JI7 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.84■□□□□ 0.61
SPG11Q96JI7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.84■□□□□ 0.61
SPG11Q96JI7 KRT18P6-201ENST00000555540 1265 ntBASIC18.84■□□□□ 0.61
SPG11Q96JI7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPG11Q96JI7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPG11Q96JI7 AC022211.4-201ENST00000625094 2161 ntBASIC18.84■□□□□ 0.61
SPG11Q96JI7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.84■□□□□ 0.61
SPG11Q96JI7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPG11Q96JI7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SPG11Q96JI7 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SPG11Q96JI7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPG11Q96JI7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.83■□□□□ 0.61
SPG11Q96JI7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SPG11Q96JI7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.83■□□□□ 0.61
SPG11Q96JI7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPG11Q96JI7 AC011767.1-201ENST00000617410 1153 ntBASIC18.83■□□□□ 0.61
SPG11Q96JI7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.83■□□□□ 0.61
SPG11Q96JI7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPG11Q96JI7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SPG11Q96JI7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPG11Q96JI7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPG11Q96JI7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPG11Q96JI7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPG11Q96JI7 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SPG11Q96JI7 AF201337.1-201ENST00000520239 748 ntBASIC18.83■□□□□ 0.6
SPG11Q96JI7 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.83■□□□□ 0.6
SPG11Q96JI7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.83■□□□□ 0.6
SPG11Q96JI7 AL138781.1-201ENST00000566567 1274 ntBASIC18.83■□□□□ 0.6
SPG11Q96JI7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SPG11Q96JI7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.83■□□□□ 0.6
SPG11Q96JI7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SPG11Q96JI7 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.82■□□□□ 0.6
SPG11Q96JI7 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.82■□□□□ 0.6
SPG11Q96JI7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.82■□□□□ 0.6
SPG11Q96JI7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPG11Q96JI7 LINC01529-204ENST00000636474 1715 ntBASIC18.82■□□□□ 0.6
SPG11Q96JI7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPG11Q96JI7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPG11Q96JI7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPG11Q96JI7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.82■□□□□ 0.6
SPG11Q96JI7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SPG11Q96JI7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.82■□□□□ 0.6
SPG11Q96JI7 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.82■□□□□ 0.6
SPG11Q96JI7 DUX4L16-201ENST00000555130 1264 ntBASIC18.82■□□□□ 0.6
SPG11Q96JI7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.82■□□□□ 0.6
SPG11Q96JI7 AC087239.1-201ENST00000622671 572 ntBASIC18.82■□□□□ 0.6
SPG11Q96JI7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPG11Q96JI7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPG11Q96JI7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPG11Q96JI7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SPG11Q96JI7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.82■□□□□ 0.6
SPG11Q96JI7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SPG11Q96JI7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms