Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CNKSR1Q969H4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
CNKSR1Q969H4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CNKSR1Q969H4 MIR663A-201ENST00000385250 93 ntBASIC27.38■■□□□ 1.97
CNKSR1Q969H4 GPX1P1-201ENST00000388829 606 ntBASIC27.38■■□□□ 1.97
CNKSR1Q969H4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CNKSR1Q969H4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC27.38■■□□□ 1.97
CNKSR1Q969H4 TESC-206ENST00000541210 936 ntTSL 3 BASIC27.38■■□□□ 1.97
CNKSR1Q969H4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC27.38■■□□□ 1.97
CNKSR1Q969H4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CNKSR1Q969H4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
CNKSR1Q969H4 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC27.38■■□□□ 1.97
CNKSR1Q969H4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CNKSR1Q969H4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
CNKSR1Q969H4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC27.37■■□□□ 1.97
CNKSR1Q969H4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC27.37■■□□□ 1.97
CNKSR1Q969H4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC27.37■■□□□ 1.97
CNKSR1Q969H4 AC068587.7-201ENST00000641602 218 ntBASIC27.37■■□□□ 1.97
CNKSR1Q969H4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC27.37■■□□□ 1.97
CNKSR1Q969H4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CNKSR1Q969H4 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.37■■□□□ 1.97
CNKSR1Q969H4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
CNKSR1Q969H4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CNKSR1Q969H4 AC135731.1-201ENST00000569415 2548 ntBASIC27.36■■□□□ 1.97
CNKSR1Q969H4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC27.36■■□□□ 1.97
CNKSR1Q969H4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC27.36■■□□□ 1.97
CNKSR1Q969H4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC27.36■■□□□ 1.97
CNKSR1Q969H4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CNKSR1Q969H4 AP003733.4-201ENST00000623785 1697 ntBASIC27.36■■□□□ 1.97
CNKSR1Q969H4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
CNKSR1Q969H4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CNKSR1Q969H4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
CNKSR1Q969H4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
CNKSR1Q969H4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC27.35■■□□□ 1.97
CNKSR1Q969H4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC27.35■■□□□ 1.97
CNKSR1Q969H4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CNKSR1Q969H4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC27.35■■□□□ 1.97
CNKSR1Q969H4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CNKSR1Q969H4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CNKSR1Q969H4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CNKSR1Q969H4 CD99P1-205ENST00000527459 561 ntBASIC27.34■■□□□ 1.97
CNKSR1Q969H4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC27.34■■□□□ 1.97
CNKSR1Q969H4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC27.34■■□□□ 1.97
CNKSR1Q969H4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CNKSR1Q969H4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CNKSR1Q969H4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CNKSR1Q969H4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CNKSR1Q969H4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
CNKSR1Q969H4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.97
CNKSR1Q969H4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CNKSR1Q969H4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC27.33■■□□□ 1.97
CNKSR1Q969H4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC27.33■■□□□ 1.97
CNKSR1Q969H4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC27.33■■□□□ 1.97
CNKSR1Q969H4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CNKSR1Q969H4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
CNKSR1Q969H4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC27.33■■□□□ 1.96
CNKSR1Q969H4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC27.32■■□□□ 1.96
CNKSR1Q969H4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC27.32■■□□□ 1.96
CNKSR1Q969H4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC27.32■■□□□ 1.96
CNKSR1Q969H4 SMUG1P1-201ENST00000590640 811 ntBASIC27.32■■□□□ 1.96
CNKSR1Q969H4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC27.32■■□□□ 1.96
CNKSR1Q969H4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC27.32■■□□□ 1.96
CNKSR1Q969H4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CNKSR1Q969H4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CNKSR1Q969H4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
CNKSR1Q969H4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CNKSR1Q969H4 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CNKSR1Q969H4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CNKSR1Q969H4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.31■■□□□ 1.96
CNKSR1Q969H4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CNKSR1Q969H4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CNKSR1Q969H4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC27.31■■□□□ 1.96
CNKSR1Q969H4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CNKSR1Q969H4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC27.31■■□□□ 1.96
CNKSR1Q969H4 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CNKSR1Q969H4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.31■■□□□ 1.96
CNKSR1Q969H4 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CNKSR1Q969H4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC27.3■■□□□ 1.96
CNKSR1Q969H4 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CNKSR1Q969H4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CNKSR1Q969H4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC27.3■■□□□ 1.96
CNKSR1Q969H4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC27.3■■□□□ 1.96
CNKSR1Q969H4 AC142086.2-201ENST00000569753 217 ntBASIC27.3■■□□□ 1.96
CNKSR1Q969H4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC27.3■■□□□ 1.96
CNKSR1Q969H4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.3■■□□□ 1.96
CNKSR1Q969H4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CNKSR1Q969H4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CNKSR1Q969H4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CNKSR1Q969H4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
CNKSR1Q969H4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CNKSR1Q969H4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CNKSR1Q969H4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
CNKSR1Q969H4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CNKSR1Q969H4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
CNKSR1Q969H4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC27.29■■□□□ 1.96
CNKSR1Q969H4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
CNKSR1Q969H4 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CNKSR1Q969H4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
CNKSR1Q969H4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CNKSR1Q969H4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms