Protein–RNA interactions for Protein: Q8WVK7

SKA2, Spindle and kinetochore-associated protein 2, humanhuman

Predicted RBP Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2Q8WVK7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 AC133561.1-201ENST00000568600 2415 ntBASIC21.79■■□□□ 1.08
SKA2Q8WVK7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SKA2Q8WVK7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.78■■□□□ 1.08
SKA2Q8WVK7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SKA2Q8WVK7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.77■■□□□ 1.08
SKA2Q8WVK7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SKA2Q8WVK7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
SKA2Q8WVK7 AC068473.5-201ENST00000616428 2072 ntBASIC21.77■■□□□ 1.08
SKA2Q8WVK7 AC092171.4-201ENST00000609130 632 ntBASIC21.77■■□□□ 1.08
SKA2Q8WVK7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SKA2Q8WVK7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SKA2Q8WVK7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SKA2Q8WVK7 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
SKA2Q8WVK7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SKA2Q8WVK7 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.76■■□□□ 1.07
SKA2Q8WVK7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SKA2Q8WVK7 AC006455.2-201ENST00000429931 906 ntBASIC21.76■■□□□ 1.07
SKA2Q8WVK7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SKA2Q8WVK7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SKA2Q8WVK7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SKA2Q8WVK7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.76■■□□□ 1.07
SKA2Q8WVK7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SKA2Q8WVK7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SKA2Q8WVK7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.75■■□□□ 1.07
SKA2Q8WVK7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
SKA2Q8WVK7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.75■■□□□ 1.07
SKA2Q8WVK7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
SKA2Q8WVK7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.75■■□□□ 1.07
SKA2Q8WVK7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SKA2Q8WVK7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SKA2Q8WVK7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SKA2Q8WVK7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SKA2Q8WVK7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SKA2Q8WVK7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SKA2Q8WVK7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SKA2Q8WVK7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SKA2Q8WVK7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SKA2Q8WVK7 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SKA2Q8WVK7 pRNA.6-201ENST00000610482 90 ntBASIC21.74■■□□□ 1.07
SKA2Q8WVK7 pRNA.5-201ENST00000612139 90 ntBASIC21.74■■□□□ 1.07
SKA2Q8WVK7 pRNA.11-201ENST00000618423 90 ntBASIC21.74■■□□□ 1.07
SKA2Q8WVK7 pRNA.13-201ENST00000619112 90 ntBASIC21.74■■□□□ 1.07
SKA2Q8WVK7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
SKA2Q8WVK7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SKA2Q8WVK7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SKA2Q8WVK7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.74■■□□□ 1.07
SKA2Q8WVK7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.74■■□□□ 1.07
SKA2Q8WVK7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SKA2Q8WVK7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SKA2Q8WVK7 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.73■■□□□ 1.07
SKA2Q8WVK7 C1orf229-201ENST00000623686 2258 ntBASIC21.73■■□□□ 1.07
SKA2Q8WVK7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.73■■□□□ 1.07
SKA2Q8WVK7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
SKA2Q8WVK7 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.73■■□□□ 1.07
SKA2Q8WVK7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SKA2Q8WVK7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.73■■□□□ 1.07
SKA2Q8WVK7 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.73■■□□□ 1.07
SKA2Q8WVK7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SKA2Q8WVK7 AC004687.1-201ENST00000579003 1625 ntBASIC21.73■■□□□ 1.07
SKA2Q8WVK7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SKA2Q8WVK7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SKA2Q8WVK7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
SKA2Q8WVK7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SKA2Q8WVK7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.72■■□□□ 1.07
SKA2Q8WVK7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SKA2Q8WVK7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.72■■□□□ 1.07
SKA2Q8WVK7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
SKA2Q8WVK7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
SKA2Q8WVK7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
SKA2Q8WVK7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SKA2Q8WVK7 SYT6-210ENST00000641643 1587 ntBASIC21.71■■□□□ 1.07
SKA2Q8WVK7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SKA2Q8WVK7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.71■■□□□ 1.07
SKA2Q8WVK7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
SKA2Q8WVK7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SKA2Q8WVK7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SKA2Q8WVK7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SKA2Q8WVK7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
SKA2Q8WVK7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.7■■□□□ 1.06
SKA2Q8WVK7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
SKA2Q8WVK7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SKA2Q8WVK7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms