Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MIR4508-201ENST00000584178 70 ntBASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 AL024507.2-201ENST00000606070 2574 ntBASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PTCHD4Q6ZW05 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTCHD4Q6ZW05 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCHD4Q6ZW05 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCHD4Q6ZW05 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.24■□□□□ 0.83
PTCHD4Q6ZW05 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PTCHD4Q6ZW05 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.24■□□□□ 0.83
PTCHD4Q6ZW05 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCHD4Q6ZW05 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.24■□□□□ 0.83
PTCHD4Q6ZW05 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCHD4Q6ZW05 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.24■□□□□ 0.83
PTCHD4Q6ZW05 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTCHD4Q6ZW05 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTCHD4Q6ZW05 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTCHD4Q6ZW05 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.23■□□□□ 0.83
PTCHD4Q6ZW05 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCHD4Q6ZW05 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCHD4Q6ZW05 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.23■□□□□ 0.83
PTCHD4Q6ZW05 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCHD4Q6ZW05 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCHD4Q6ZW05 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTCHD4Q6ZW05 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 AL353803.4-201ENST00000565882 1934 ntBASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 AC004448.1-201ENST00000458332 883 ntBASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.22■□□□□ 0.83
PTCHD4Q6ZW05 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCHD4Q6ZW05 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCHD4Q6ZW05 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.21■□□□□ 0.83
PTCHD4Q6ZW05 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.21■□□□□ 0.83
PTCHD4Q6ZW05 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PTCHD4Q6ZW05 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCHD4Q6ZW05 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCHD4Q6ZW05 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCHD4Q6ZW05 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTCHD4Q6ZW05 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTCHD4Q6ZW05 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
PTCHD4Q6ZW05 FBXW4P1-201ENST00000426721 2239 ntBASIC20.21■□□□□ 0.83
PTCHD4Q6ZW05 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCHD4Q6ZW05 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCHD4Q6ZW05 KRT8P33-201ENST00000508125 1423 ntBASIC20.2■□□□□ 0.82
PTCHD4Q6ZW05 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCHD4Q6ZW05 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.2■□□□□ 0.82
PTCHD4Q6ZW05 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.2■□□□□ 0.82
PTCHD4Q6ZW05 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.2■□□□□ 0.82
PTCHD4Q6ZW05 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.2■□□□□ 0.82
PTCHD4Q6ZW05 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCHD4Q6ZW05 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PTCHD4Q6ZW05 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PTCHD4Q6ZW05 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PTCHD4Q6ZW05 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
PTCHD4Q6ZW05 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCHD4Q6ZW05 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTCHD4Q6ZW05 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCHD4Q6ZW05 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCHD4Q6ZW05 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCHD4Q6ZW05 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PTCHD4Q6ZW05 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCHD4Q6ZW05 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PTCHD4Q6ZW05 AC080038.3-201ENST00000623346 1952 ntBASIC20.19■□□□□ 0.82
PTCHD4Q6ZW05 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PTCHD4Q6ZW05 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCHD4Q6ZW05 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.18■□□□□ 0.82
PTCHD4Q6ZW05 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCHD4Q6ZW05 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCHD4Q6ZW05 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.18■□□□□ 0.82
PTCHD4Q6ZW05 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.18■□□□□ 0.82
PTCHD4Q6ZW05 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCHD4Q6ZW05 AC103724.3-201ENST00000564481 992 ntBASIC20.18■□□□□ 0.82
PTCHD4Q6ZW05 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PTCHD4Q6ZW05 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCHD4Q6ZW05 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCHD4Q6ZW05 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PTCHD4Q6ZW05 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PTCHD4Q6ZW05 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.17■□□□□ 0.82
PTCHD4Q6ZW05 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.17■□□□□ 0.82
PTCHD4Q6ZW05 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms