Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 AC105233.4-201ENST00000642045 216 ntBASIC17.85■□□□□ 0.45
C9orf139Q6ZV77 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
C9orf139Q6ZV77 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
C9orf139Q6ZV77 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.83■□□□□ 0.45
C9orf139Q6ZV77 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
C9orf139Q6ZV77 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
C9orf139Q6ZV77 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 KRT18P14-201ENST00000534205 1250 ntBASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
C9orf139Q6ZV77 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 AC079630.1-202ENST00000618127 1840 ntBASIC17.82■□□□□ 0.44
C9orf139Q6ZV77 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 LINC01124-201ENST00000409786 2117 ntBASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 AL137784.2-201ENST00000607332 1000 ntBASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
C9orf139Q6ZV77 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
C9orf139Q6ZV77 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
C9orf139Q6ZV77 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms