Protein–RNA interactions for Protein: Q6VNS1

Ntrk3, NT-3 growth factor receptor, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ntrk3Q6VNS1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Gm9959-201ENSMUST00000068277 390 ntBASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.38■□□□□ 0.85
Ntrk3Q6VNS1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ntrk3Q6VNS1 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ntrk3Q6VNS1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.37■□□□□ 0.85
Ntrk3Q6VNS1 Gm22238-201ENSMUST00000175222 88 ntBASIC20.37■□□□□ 0.85
Ntrk3Q6VNS1 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
Ntrk3Q6VNS1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ntrk3Q6VNS1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ntrk3Q6VNS1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ntrk3Q6VNS1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ntrk3Q6VNS1 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ntrk3Q6VNS1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Ntrk3Q6VNS1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ntrk3Q6VNS1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ntrk3Q6VNS1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ntrk3Q6VNS1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ntrk3Q6VNS1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ntrk3Q6VNS1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Ntrk3Q6VNS1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ntrk3Q6VNS1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.35■□□□□ 0.85
Ntrk3Q6VNS1 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.35■□□□□ 0.85
Ntrk3Q6VNS1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ntrk3Q6VNS1 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ntrk3Q6VNS1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ntrk3Q6VNS1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ntrk3Q6VNS1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ntrk3Q6VNS1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ntrk3Q6VNS1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ntrk3Q6VNS1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ntrk3Q6VNS1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ntrk3Q6VNS1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ntrk3Q6VNS1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
Ntrk3Q6VNS1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.33■□□□□ 0.85
Ntrk3Q6VNS1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ntrk3Q6VNS1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ntrk3Q6VNS1 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ntrk3Q6VNS1 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ntrk3Q6VNS1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Ntrk3Q6VNS1 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ntrk3Q6VNS1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.33■□□□□ 0.84
Ntrk3Q6VNS1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ntrk3Q6VNS1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ntrk3Q6VNS1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ntrk3Q6VNS1 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.32■□□□□ 0.84
Ntrk3Q6VNS1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ntrk3Q6VNS1 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.32■□□□□ 0.84
Ntrk3Q6VNS1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ntrk3Q6VNS1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ntrk3Q6VNS1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ntrk3Q6VNS1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Ntrk3Q6VNS1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ntrk3Q6VNS1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ntrk3Q6VNS1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Ntrk3Q6VNS1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ntrk3Q6VNS1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ntrk3Q6VNS1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ntrk3Q6VNS1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ntrk3Q6VNS1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ntrk3Q6VNS1 AA386476-201ENSMUST00000098781 1665 ntBASIC20.3■□□□□ 0.84
Ntrk3Q6VNS1 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ntrk3Q6VNS1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ntrk3Q6VNS1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ntrk3Q6VNS1 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ntrk3Q6VNS1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ntrk3Q6VNS1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.29■□□□□ 0.84
Ntrk3Q6VNS1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ntrk3Q6VNS1 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.29■□□□□ 0.84
Ntrk3Q6VNS1 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ntrk3Q6VNS1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ntrk3Q6VNS1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ntrk3Q6VNS1 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ntrk3Q6VNS1 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Ntrk3Q6VNS1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ntrk3Q6VNS1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.28■□□□□ 0.84
Ntrk3Q6VNS1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms