Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 HIS5YIL116W 1158 nt3.71□□□□□ -1.82
RRP40Q08285 MRPL24YMR193W 777 nt3.71□□□□□ -1.82
RRP40Q08285 YNL143CYNL143C 393 nt3.71□□□□□ -1.82
RRP40Q08285 FAA1YOR317W 2103 nt3.71□□□□□ -1.82
RRP40Q08285 ZRC1YMR243C 1329 nt3.7□□□□□ -1.82
RRP40Q08285 TRK1YJL129C 3708 nt3.7□□□□□ -1.82
RRP40Q08285 IMG2YCR071C 441 nt3.7□□□□□ -1.82
RRP40Q08285 YDR230WYDR230W 348 nt3.7□□□□□ -1.82
RRP40Q08285 IGO2YHR132W-A 396 nt3.7□□□□□ -1.82
RRP40Q08285 SWC7YLR385C 399 nt3.7□□□□□ -1.82
RRP40Q08285 SET4YJL105W 1683 nt3.7□□□□□ -1.82
RRP40Q08285 RGP1YDR137W 1992 nt3.7□□□□□ -1.82
RRP40Q08285 YBR225WYBR225W 2703 nt3.7□□□□□ -1.82
RRP40Q08285 SRP72YPL210C 1923 nt3.7□□□□□ -1.82
RRP40Q08285 DEG1YFL001W 1329 nt3.7□□□□□ -1.82
RRP40Q08285 BIK1YCL029C 1323 nt3.7□□□□□ -1.82
RRP40Q08285 ARO80YDR421W 2853 nt3.69□□□□□ -1.82
RRP40Q08285 NTH1YDR001C 2256 nt3.69□□□□□ -1.82
RRP40Q08285 YER067C-AYER067C-A 324 nt3.69□□□□□ -1.82
RRP40Q08285 OAR1YKL055C 837 nt3.69□□□□□ -1.82
RRP40Q08285 YKL162C-AYKL162C-A 153 nt3.69□□□□□ -1.82
RRP40Q08285 TFA1YKL028W 1449 nt3.69□□□□□ -1.82
RRP40Q08285 RDH54YBR073W 2877 nt3.69□□□□□ -1.82
RRP40Q08285 ACE2YLR131C 2313 nt3.69□□□□□ -1.82
RRP40Q08285 GWT1YJL091C 1473 nt3.68□□□□□ -1.82
RRP40Q08285 YDR444WYDR444W 2064 nt3.68□□□□□ -1.82
RRP40Q08285 MAG1YER142C 891 nt3.68□□□□□ -1.82
RRP40Q08285 SPO12YHR152W 522 nt3.68□□□□□ -1.82
RRP40Q08285 NSE1YLR007W 1011 nt3.68□□□□□ -1.82
RRP40Q08285 CWC25YNL245C 540 nt3.68□□□□□ -1.82
RRP40Q08285 ISA2YPR067W 558 nt3.68□□□□□ -1.82
RRP40Q08285 MUM3YOR298W 1440 nt3.68□□□□□ -1.82
RRP40Q08285 USA1YML029W 2517 nt3.68□□□□□ -1.82
RRP40Q08285 YER077CYER077C 2067 nt3.67□□□□□ -1.82
RRP40Q08285 ELF1YKL160W 438 nt3.67□□□□□ -1.82
RRP40Q08285 SPC34YKR037C 888 nt3.67□□□□□ -1.82
RRP40Q08285 IES3YLR052W 753 nt3.67□□□□□ -1.82
RRP40Q08285 GDT1YBR187W 843 nt3.67□□□□□ -1.82
RRP40Q08285 STP22YCL008C 1158 nt3.67□□□□□ -1.82
RRP40Q08285 NCR1YPL006W 3513 nt3.67□□□□□ -1.82
RRP40Q08285 ATG32YIL146C 1590 nt3.67□□□□□ -1.82
RRP40Q08285 GPI10YGL142C 1851 nt3.67□□□□□ -1.82
RRP40Q08285 ENT1YDL161W 1365 nt3.66□□□□□ -1.82
RRP40Q08285 MSW1YDR268W 1140 nt3.66□□□□□ -1.82
RRP40Q08285 SPO73YER046W 432 nt3.66□□□□□ -1.82
RRP40Q08285 CNN1YFR046C 1086 nt3.66□□□□□ -1.82
RRP40Q08285 YHR173CYHR173C 339 nt3.66□□□□□ -1.82
RRP40Q08285 YBL036CYBL036C 774 nt3.66□□□□□ -1.82
RRP40Q08285 IOC2YLR095C 2439 nt3.66□□□□□ -1.82
RRP40Q08285 LOS1YKL205W 3303 nt3.66□□□□□ -1.82
RRP40Q08285 MDL1YLR188W 2088 nt3.66□□□□□ -1.82
RRP40Q08285 ROD1YOR018W 2514 nt3.66□□□□□ -1.82
RRP40Q08285 PPQ1YPL179W 1650 nt3.65□□□□□ -1.82
RRP40Q08285 VPS36YLR417W 1701 nt3.65□□□□□ -1.82
RRP40Q08285 CPR1YDR155C 489 nt3.65□□□□□ -1.83
RRP40Q08285 YJR096WYJR096W 849 nt3.65□□□□□ -1.83
RRP40Q08285 FLD1YLR404W 858 nt3.65□□□□□ -1.83
RRP40Q08285 YMR114CYMR114C 1107 nt3.65□□□□□ -1.83
RRP40Q08285 YBL059WYBL059W 582 nt3.65□□□□□ -1.83
RRP40Q08285 YOL079WYOL079W 399 nt3.65□□□□□ -1.83
RRP40Q08285 FSH3YOR280C 801 nt3.65□□□□□ -1.83
RRP40Q08285 KIP3YGL216W 2418 nt3.65□□□□□ -1.83
RRP40Q08285 YPR003CYPR003C 2265 nt3.65□□□□□ -1.83
RRP40Q08285 FKH1YIL131C 1455 nt3.65□□□□□ -1.83
RRP40Q08285 DHH1YDL160C 1521 nt3.65□□□□□ -1.83
RRP40Q08285 YTM1YOR272W 1383 nt3.64□□□□□ -1.83
RRP40Q08285 IDS2YJL146W 1410 nt3.64□□□□□ -1.83
RRP40Q08285 CWC2YDL209C 1020 nt3.64□□□□□ -1.83
RRP40Q08285 DSD1YGL196W 1287 nt3.64□□□□□ -1.83
RRP40Q08285 RPS1BYML063W 768 nt3.64□□□□□ -1.83
RRP40Q08285 TPP1YMR156C 717 nt3.64□□□□□ -1.83
RRP40Q08285 AIM21YIR003W 2040 nt3.64□□□□□ -1.83
RRP40Q08285 UBP6YFR010W 1500 nt3.64□□□□□ -1.83
RRP40Q08285 RIM4YHL024W 2142 nt3.64□□□□□ -1.83
RRP40Q08285 LTV1YKL143W 1392 nt3.63□□□□□ -1.83
RRP40Q08285 SPO77YLR341W 1434 nt3.63□□□□□ -1.83
RRP40Q08285 YJR112W-AYJR112W-A 330 nt3.63□□□□□ -1.83
RRP40Q08285 TAF8YML114C 1533 nt3.63□□□□□ -1.83
RRP40Q08285 PDR12YPL058C 4536 nt3.63□□□□□ -1.83
RRP40Q08285 GAS2YLR343W 1668 nt3.62□□□□□ -1.83
RRP40Q08285 FMP25YLR077W 1752 nt3.62□□□□□ -1.83
RRP40Q08285 KRE5YOR336W 4098 nt3.62□□□□□ -1.83
RRP40Q08285 PRP11YDL043C 801 nt3.62□□□□□ -1.83
RRP40Q08285 VMA22YHR060W 546 nt3.62□□□□□ -1.83
RRP40Q08285 BAT2YJR148W 1131 nt3.62□□□□□ -1.83
RRP40Q08285 YLR122CYLR122C 378 nt3.62□□□□□ -1.83
RRP40Q08285 NRK1YNL129W 723 nt3.62□□□□□ -1.83
RRP40Q08285 MRPS9YBR146W 837 nt3.62□□□□□ -1.83
RRP40Q08285 SSL1YLR005W 1386 nt3.62□□□□□ -1.83
RRP40Q08285 PHO12YHR215W 1404 nt3.61□□□□□ -1.83
RRP40Q08285 PHO11YAR071W 1404 nt3.61□□□□□ -1.83
RRP40Q08285 GLN4YOR168W 2430 nt3.61□□□□□ -1.83
RRP40Q08285 AIP1YMR092C 1848 nt3.61□□□□□ -1.83
RRP40Q08285 RPB2YOR151C 3675 nt3.61□□□□□ -1.83
RRP40Q08285 ABP140YOR239W 1887 nt3.61□□□□□ -1.83
RRP40Q08285 TAF6YGL112C 1551 nt3.61□□□□□ -1.83
RRP40Q08285 YDR133CYDR133C 336 nt3.61□□□□□ -1.83
RRP40Q08285 SPI1YER150W 447 nt3.61□□□□□ -1.83
RRP40Q08285 YGR139WYGR139W 339 nt3.61□□□□□ -1.83
RRP40Q08285 ASI2YNL159C 870 nt3.61□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms