Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CLDN2P57739 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN2P57739 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN2P57739 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CLDN2P57739 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
CLDN2P57739 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN2P57739 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.88■■□□□ 1.09
CLDN2P57739 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.88■■□□□ 1.09
CLDN2P57739 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN2P57739 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN2P57739 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLDN2P57739 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN2P57739 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN2P57739 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN2P57739 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN2P57739 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN2P57739 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN2P57739 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN2P57739 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN2P57739 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.87■■□□□ 1.09
CLDN2P57739 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CLDN2P57739 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
CLDN2P57739 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CLDN2P57739 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.86■■□□□ 1.09
CLDN2P57739 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN2P57739 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN2P57739 KRT18P5-201ENST00000436075 1291 ntBASIC21.86■■□□□ 1.09
CLDN2P57739 AC123595.1-201ENST00000440769 1046 ntBASIC21.86■■□□□ 1.09
CLDN2P57739 AC105233.4-201ENST00000642045 216 ntBASIC21.86■■□□□ 1.09
CLDN2P57739 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CLDN2P57739 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CLDN2P57739 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.85■■□□□ 1.09
CLDN2P57739 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.85■■□□□ 1.09
CLDN2P57739 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.85■■□□□ 1.09
CLDN2P57739 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN2P57739 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN2P57739 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.85■■□□□ 1.09
CLDN2P57739 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CLDN2P57739 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN2P57739 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN2P57739 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN2P57739 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
CLDN2P57739 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN2P57739 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CLDN2P57739 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CLDN2P57739 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.84■■□□□ 1.09
CLDN2P57739 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN2P57739 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.84■■□□□ 1.09
CLDN2P57739 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.84■■□□□ 1.09
CLDN2P57739 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.84■■□□□ 1.09
CLDN2P57739 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
CLDN2P57739 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN2P57739 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.84■■□□□ 1.09
CLDN2P57739 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.84■■□□□ 1.09
CLDN2P57739 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CLDN2P57739 CCDC92B-201ENST00000575506 885 ntBASIC21.84■■□□□ 1.09
CLDN2P57739 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CLDN2P57739 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN2P57739 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN2P57739 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN2P57739 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
CLDN2P57739 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN2P57739 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.83■■□□□ 1.09
CLDN2P57739 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.83■■□□□ 1.09
CLDN2P57739 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.83■■□□□ 1.09
CLDN2P57739 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CLDN2P57739 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLDN2P57739 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLDN2P57739 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CLDN2P57739 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.83■■□□□ 1.08
CLDN2P57739 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN2P57739 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN2P57739 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN2P57739 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
CLDN2P57739 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN2P57739 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.82■■□□□ 1.08
CLDN2P57739 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CLDN2P57739 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.82■■□□□ 1.08
CLDN2P57739 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN2P57739 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.82■■□□□ 1.08
CLDN2P57739 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.82■■□□□ 1.08
CLDN2P57739 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.82■■□□□ 1.08
CLDN2P57739 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.82■■□□□ 1.08
CLDN2P57739 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.82■■□□□ 1.08
CLDN2P57739 IKBKGP1-201ENST00000612193 1073 ntBASIC21.82■■□□□ 1.08
CLDN2P57739 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.82■■□□□ 1.08
CLDN2P57739 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CLDN2P57739 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.82■■□□□ 1.08
CLDN2P57739 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN2P57739 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CLDN2P57739 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.81■■□□□ 1.08
CLDN2P57739 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN2P57739 AC093323.1-202ENST00000635031 2045 ntBASIC21.81■■□□□ 1.08
CLDN2P57739 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN2P57739 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CLDN2P57739 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN2P57739 AC022517.1-201ENST00000592429 346 ntBASIC21.81■■□□□ 1.08
CLDN2P57739 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.81■■□□□ 1.08
CLDN2P57739 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CLDN2P57739 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms