Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
WNT3P56703 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
WNT3P56703 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
WNT3P56703 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3P56703 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3P56703 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3P56703 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3P56703 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.94■□□□□ 0.94
WNT3P56703 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3P56703 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3P56703 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
WNT3P56703 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
WNT3P56703 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3P56703 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3P56703 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3P56703 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.93■□□□□ 0.94
WNT3P56703 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3P56703 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.93■□□□□ 0.94
WNT3P56703 DUX4L4-201ENST00000566884 1269 ntBASIC20.93■□□□□ 0.94
WNT3P56703 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3P56703 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3P56703 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3P56703 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3P56703 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.93■□□□□ 0.94
WNT3P56703 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3P56703 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
WNT3P56703 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
WNT3P56703 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.92■□□□□ 0.94
WNT3P56703 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3P56703 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3P56703 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3P56703 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3P56703 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3P56703 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.92■□□□□ 0.94
WNT3P56703 AC009102.2-201ENST00000606772 1639 ntBASIC20.92■□□□□ 0.94
WNT3P56703 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3P56703 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3P56703 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3P56703 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3P56703 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
WNT3P56703 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
WNT3P56703 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
WNT3P56703 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
WNT3P56703 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
WNT3P56703 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
WNT3P56703 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
WNT3P56703 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
WNT3P56703 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3P56703 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3P56703 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
WNT3P56703 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
WNT3P56703 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3P56703 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
WNT3P56703 AC008406.3-201ENST00000620001 1374 ntBASIC20.9■□□□□ 0.94
WNT3P56703 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.9■□□□□ 0.94
WNT3P56703 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.9■□□□□ 0.94
WNT3P56703 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.9■□□□□ 0.94
WNT3P56703 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.9■□□□□ 0.94
WNT3P56703 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3P56703 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3P56703 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.9■□□□□ 0.94
WNT3P56703 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.9■□□□□ 0.94
WNT3P56703 AC137767.1-201ENST00000602918 1920 ntBASIC20.9■□□□□ 0.94
WNT3P56703 AC092053.2-201ENST00000640557 1818 ntBASIC20.9■□□□□ 0.94
WNT3P56703 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
WNT3P56703 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
WNT3P56703 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
WNT3P56703 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
WNT3P56703 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
WNT3P56703 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
WNT3P56703 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.89■□□□□ 0.93
WNT3P56703 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.89■□□□□ 0.93
WNT3P56703 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.89■□□□□ 0.93
WNT3P56703 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
WNT3P56703 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
WNT3P56703 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
WNT3P56703 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.88■□□□□ 0.93
WNT3P56703 AC010997.5-201ENST00000609182 354 ntBASIC20.88■□□□□ 0.93
WNT3P56703 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
WNT3P56703 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
WNT3P56703 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
WNT3P56703 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3P56703 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
WNT3P56703 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3P56703 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3P56703 MTDHP2-201ENST00000601468 714 ntBASIC20.87■□□□□ 0.93
WNT3P56703 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.87■□□□□ 0.93
WNT3P56703 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.87■□□□□ 0.93
WNT3P56703 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.87■□□□□ 0.93
WNT3P56703 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
WNT3P56703 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3P56703 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3P56703 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3P56703 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3P56703 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
WNT3P56703 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
WNT3P56703 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
WNT3P56703 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
WNT3P56703 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
WNT3P56703 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms