Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 KRT125P-201ENST00000546827 989 ntBASIC21.57■■□□□ 1.04
CDH13P55290 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH13P55290 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH13P55290 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH13P55290 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH13P55290 FP325331.1-202ENST00000623531 1380 ntBASIC21.57■■□□□ 1.04
CDH13P55290 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CDH13P55290 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH13P55290 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CDH13P55290 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH13P55290 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH13P55290 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.56■■□□□ 1.04
CDH13P55290 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
CDH13P55290 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH13P55290 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
CDH13P55290 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH13P55290 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.56■■□□□ 1.04
CDH13P55290 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.56■■□□□ 1.04
CDH13P55290 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDH13P55290 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH13P55290 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CDH13P55290 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH13P55290 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH13P55290 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH13P55290 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH13P55290 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH13P55290 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
CDH13P55290 MIR4787-201ENST00000607364 84 ntBASIC21.55■■□□□ 1.04
CDH13P55290 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CDH13P55290 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH13P55290 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH13P55290 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CDH13P55290 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDH13P55290 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH13P55290 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH13P55290 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CDH13P55290 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH13P55290 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
CDH13P55290 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.54■■□□□ 1.04
CDH13P55290 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH13P55290 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH13P55290 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.54■■□□□ 1.04
CDH13P55290 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH13P55290 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
CDH13P55290 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH13P55290 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDH13P55290 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH13P55290 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
CDH13P55290 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.53■■□□□ 1.04
CDH13P55290 AC239859.2-201ENST00000444165 318 ntBASIC21.53■■□□□ 1.04
CDH13P55290 Z92544.1-202ENST00000571933 1220 ntBASIC21.53■■□□□ 1.04
CDH13P55290 MTDHP2-201ENST00000601468 714 ntBASIC21.53■■□□□ 1.04
CDH13P55290 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH13P55290 AC009102.2-201ENST00000606772 1639 ntBASIC21.53■■□□□ 1.04
CDH13P55290 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH13P55290 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH13P55290 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CDH13P55290 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH13P55290 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CDH13P55290 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH13P55290 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.52■■□□□ 1.04
CDH13P55290 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH13P55290 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CDH13P55290 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.52■■□□□ 1.04
CDH13P55290 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH13P55290 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH13P55290 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.52■■□□□ 1.04
CDH13P55290 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.52■■□□□ 1.04
CDH13P55290 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
CDH13P55290 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH13P55290 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH13P55290 AC092053.2-201ENST00000640557 1818 ntBASIC21.51■■□□□ 1.03
CDH13P55290 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
CDH13P55290 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH13P55290 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CDH13P55290 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH13P55290 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CDH13P55290 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH13P55290 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.5■■□□□ 1.03
CDH13P55290 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH13P55290 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH13P55290 DUX4L4-201ENST00000566884 1269 ntBASIC21.5■■□□□ 1.03
CDH13P55290 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.5■■□□□ 1.03
CDH13P55290 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
CDH13P55290 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH13P55290 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
CDH13P55290 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CDH13P55290 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH13P55290 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH13P55290 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDH13P55290 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH13P55290 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDH13P55290 TSPY9P-201ENST00000440215 945 ntBASIC21.49■■□□□ 1.03
CDH13P55290 TSPY11P-201ENST00000442607 1045 ntBASIC21.49■■□□□ 1.03
CDH13P55290 AC009299.2-201ENST00000482477 511 ntBASIC21.49■■□□□ 1.03
CDH13P55290 AC010997.5-201ENST00000609182 354 ntBASIC21.49■■□□□ 1.03
CDH13P55290 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDH13P55290 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CDH13P55290 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH13P55290 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms