Protein–RNA interactions for Protein: P40073

SHO1, High osmolarity signaling protein SHO1, yeastyeast

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHO1P40073 tS(AGA)D3tS(AGA)D3 83 nt4□□□□□ -1.77
SHO1P40073 YIL165CYIL165C 360 nt4□□□□□ -1.77
SHO1P40073 YOL162WYOL162W 648 nt4□□□□□ -1.77
SHO1P40073 BTS1YPL069C 1008 nt4□□□□□ -1.77
SHO1P40073 YPR071WYPR071W 636 nt4□□□□□ -1.77
SHO1P40073 NMD3YHR170W 1557 nt4□□□□□ -1.77
SHO1P40073 YMR111CYMR111C 1389 nt4□□□□□ -1.77
SHO1P40073 PHO84YML123C 1764 nt3.99□□□□□ -1.77
SHO1P40073 IZH3YLR023C 1632 nt3.99□□□□□ -1.77
SHO1P40073 SOF1YLL011W 1470 nt3.99□□□□□ -1.77
SHO1P40073 TEC1YBR083W 1461 nt3.99□□□□□ -1.77
SHO1P40073 CRT10YOL063C 2874 nt3.99□□□□□ -1.77
SHO1P40073 NAT2YGR147C 867 nt3.99□□□□□ -1.77
SHO1P40073 YGR149WYGR149W 1299 nt3.99□□□□□ -1.77
SHO1P40073 COA3YJL062W-A 258 nt3.99□□□□□ -1.77
SHO1P40073 KTR2YKR061W 1278 nt3.99□□□□□ -1.77
SHO1P40073 ORM2YLR350W 651 nt3.99□□□□□ -1.77
SHO1P40073 RGS2YOR107W 930 nt3.99□□□□□ -1.77
SHO1P40073 CNS1YBR155W 1158 nt3.99□□□□□ -1.77
SHO1P40073 NGL3YML118W 1518 nt3.99□□□□□ -1.77
SHO1P40073 VID22YLR373C 2706 nt3.99□□□□□ -1.77
SHO1P40073 SKG3YLR187W 3081 nt3.98□□□□□ -1.77
SHO1P40073 YPL260WYPL260W 1656 nt3.98□□□□□ -1.77
SHO1P40073 YCR050CYCR050C 309 nt3.98□□□□□ -1.77
SHO1P40073 LSO1YJR005C-A 282 nt3.98□□□□□ -1.77
SHO1P40073 NSE1YLR007W 1011 nt3.98□□□□□ -1.77
SHO1P40073 YLR364C-AYLR364C-A 123 nt3.98□□□□□ -1.77
SHO1P40073 URA4YLR420W 1095 nt3.98□□□□□ -1.77
SHO1P40073 VPS21YOR089C 633 nt3.98□□□□□ -1.77
SHO1P40073 MUM2YBR057C 1101 nt3.98□□□□□ -1.77
SHO1P40073 CBP3YPL215W 1008 nt3.98□□□□□ -1.77
SHO1P40073 REI1YBR267W 1182 nt3.98□□□□□ -1.77
SHO1P40073 CEG1YGL130W 1380 nt3.98□□□□□ -1.77
SHO1P40073 MDM38YOL027C 1722 nt3.98□□□□□ -1.77
SHO1P40073 SRO9YCL037C 1305 nt3.97□□□□□ -1.77
SHO1P40073 MDM30YLR368W 1797 nt3.97□□□□□ -1.77
SHO1P40073 CDC6YJL194W 1542 nt3.97□□□□□ -1.77
SHO1P40073 GRC3YLL035W 1899 nt3.97□□□□□ -1.77
SHO1P40073 YER145C-AYER145C-A 438 nt3.97□□□□□ -1.77
SHO1P40073 HOT13YKL084W 351 nt3.97□□□□□ -1.77
SHO1P40073 ACP1YKL192C 378 nt3.97□□□□□ -1.77
SHO1P40073 YLR042CYLR042C 486 nt3.97□□□□□ -1.77
SHO1P40073 YNL057WYNL057W 333 nt3.97□□□□□ -1.77
SHO1P40073 MDJ2YNL328C 441 nt3.97□□□□□ -1.77
SHO1P40073 YPR142CYPR142C 564 nt3.97□□□□□ -1.77
SHO1P40073 YCL022CYCL022C 516 nt3.97□□□□□ -1.77
SHO1P40073 EUG1YDR518W 1554 nt3.97□□□□□ -1.77
SHO1P40073 MPS3YJL019W 2049 nt3.97□□□□□ -1.77
SHO1P40073 PFK1YGR240C 2964 nt3.96□□□□□ -1.77
SHO1P40073 YLR345WYLR345W 1530 nt3.96□□□□□ -1.78
SHO1P40073 NPL4YBR170C 1743 nt3.96□□□□□ -1.78
SHO1P40073 YDL186WYDL186W 834 nt3.96□□□□□ -1.78
SHO1P40073 GIC2YDR309C 1152 nt3.96□□□□□ -1.78
SHO1P40073 MPS2YGL075C 1164 nt3.96□□□□□ -1.78
SHO1P40073 YRA2YKL214C 612 nt3.96□□□□□ -1.78
SHO1P40073 JLP1YLL057C 1239 nt3.96□□□□□ -1.78
SHO1P40073 YNL226WYNL226W 411 nt3.96□□□□□ -1.78
SHO1P40073 MDM12YOL009C 816 nt3.96□□□□□ -1.78
SHO1P40073 TMA16YOR252W 537 nt3.96□□□□□ -1.78
SHO1P40073 RTC1YOL138C 4026 nt3.95□□□□□ -1.78
SHO1P40073 GPB1YOR371C 2694 nt3.95□□□□□ -1.78
SHO1P40073 MSC2YDR205W 2175 nt3.95□□□□□ -1.78
SHO1P40073 DPH6YLR143W 2058 nt3.95□□□□□ -1.78
SHO1P40073 YCR015CYCR015C 954 nt3.95□□□□□ -1.78
SHO1P40073 BCP1YDR361C 852 nt3.95□□□□□ -1.78
SHO1P40073 YDR545C-AYDR545C-A 480 nt3.95□□□□□ -1.78
SHO1P40073 RIP1YEL024W 648 nt3.95□□□□□ -1.78
SHO1P40073 YEL077W-AYEL077W-A 483 nt3.95□□□□□ -1.78
SHO1P40073 YER190C-BYER190C-B 483 nt3.95□□□□□ -1.78
SHO1P40073 YFL068WYFL068W 483 nt3.95□□□□□ -1.78
SHO1P40073 RMR1YGL250W 726 nt3.95□□□□□ -1.78
SHO1P40073 PEX21YGR239C 867 nt3.95□□□□□ -1.78
SHO1P40073 YGR296C-BYGR296C-B 483 nt3.95□□□□□ -1.78
SHO1P40073 YHL050W-AYHL050W-A 483 nt3.95□□□□□ -1.78
SHO1P40073 SAE3YHR079C-A 276 nt3.95□□□□□ -1.78
SHO1P40073 YHR219C-AYHR219C-A 483 nt3.95□□□□□ -1.78
SHO1P40073 YIL177W-AYIL177W-A 483 nt3.95□□□□□ -1.78
SHO1P40073 ALB1YJL122W 528 nt3.95□□□□□ -1.78
SHO1P40073 YJL225W-AYJL225W-A 483 nt3.95□□□□□ -1.78
SHO1P40073 YAL047W-AYAL047W-A 330 nt3.95□□□□□ -1.78
SHO1P40073 YKL177WYKL177W 339 nt3.95□□□□□ -1.78
SHO1P40073 MTD1YKR080W 963 nt3.95□□□□□ -1.78
SHO1P40073 YLL066W-AYLL066W-A 483 nt3.95□□□□□ -1.78
SHO1P40073 YLL067W-AYLL067W-A 483 nt3.95□□□□□ -1.78
SHO1P40073 YAR023CYAR023C 540 nt3.95□□□□□ -1.78
SHO1P40073 YLR466C-AYLR466C-A 483 nt3.95□□□□□ -1.78
SHO1P40073 YLR467C-AYLR467C-A 483 nt3.95□□□□□ -1.78
SHO1P40073 YML133W-BYML133W-B 483 nt3.95□□□□□ -1.78
SHO1P40073 YMR085WYMR085W 1299 nt3.95□□□□□ -1.78
SHO1P40073 ERD2YBL040C 660 nt3.95□□□□□ -1.78
SHO1P40073 RUF21RUF21 707 nt3.95□□□□□ -1.78
SHO1P40073 YNL162W-AYNL162W-A 219 nt3.95□□□□□ -1.78
SHO1P40073 YNL339W-BYNL339W-B 483 nt3.95□□□□□ -1.78
SHO1P40073 YBL113W-AYBL113W-A 483 nt3.95□□□□□ -1.78
SHO1P40073 PNT1YOR266W 1272 nt3.95□□□□□ -1.78
SHO1P40073 YOR396C-AYOR396C-A 483 nt3.95□□□□□ -1.78
SHO1P40073 YPL283W-BYPL283W-B 483 nt3.95□□□□□ -1.78
SHO1P40073 SUT2YPR009W 807 nt3.95□□□□□ -1.78
SHO1P40073 YPR204C-AYPR204C-A 483 nt3.95□□□□□ -1.78
SHO1P40073 ALG11YNL048W 1647 nt3.95□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms