Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 RTT102YGR275W 474 nt5.35□□□□□ -1.55
PUB1P32588 NNT1YLR285W 786 nt5.35□□□□□ -1.55
PUB1P32588 HLJ1YMR161W 675 nt5.35□□□□□ -1.55 RIP-Chip
PUB1P32588 RFC5YBR087W 1065 nt5.35□□□□□ -1.55
PUB1P32588 RPS9BYBR189W 588 nt5.35□□□□□ -1.55
PUB1P32588 PKC1YBL105C 3456 nt5.35□□□□□ -1.55
PUB1P32588 HIR1YBL008W 2523 nt5.35□□□□□ -1.55
PUB1P32588 FRE5YOR384W 2085 nt5.35□□□□□ -1.55
PUB1P32588 GCD1YOR260W 1737 nt5.34□□□□□ -1.55
PUB1P32588 TFA1YKL028W 1449 nt5.34□□□□□ -1.55 RIP-Chip
PUB1P32588 MET17YLR303W 1335 nt5.34□□□□□ -1.55
PUB1P32588 YOR192C-AYOR192C-A 1317 nt5.34□□□□□ -1.55
PUB1P32588 YOR343W-AYOR343W-A 1317 nt5.34□□□□□ -1.55
PUB1P32588 CDC50YCR094W 1176 nt5.34□□□□□ -1.55
PUB1P32588 SDC1YDR469W 528 nt5.34□□□□□ -1.55
PUB1P32588 DIG2YDR480W 972 nt5.34□□□□□ -1.55
PUB1P32588 MAM1YER106W 909 nt5.34□□□□□ -1.55
PUB1P32588 SEC4YFL005W 648 nt5.34□□□□□ -1.55 RIP-Chip
PUB1P32588 YGL041W-AYGL041W-A 465 nt5.34□□□□□ -1.55
PUB1P32588 YGL109WYGL109W 324 nt5.34□□□□□ -1.55
PUB1P32588 RPS2YGL123W 765 nt5.34□□□□□ -1.55
PUB1P32588 YHL018WYHL018W 363 nt5.34□□□□□ -1.55
PUB1P32588 TIM10YHR005C-A 282 nt5.34□□□□□ -1.55
PUB1P32588 YKR047WYKR047W 306 nt5.34□□□□□ -1.55
PUB1P32588 YNL097W-AYNL097W-A 156 nt5.34□□□□□ -1.55
PUB1P32588 YOR293C-AYOR293C-A 150 nt5.34□□□□□ -1.55
PUB1P32588 ROX1YPR065W 1107 nt5.34□□□□□ -1.55 RIP-Chip
PUB1P32588 POP1YNL221C 2628 nt5.34□□□□□ -1.55
PUB1P32588 IME4YGL192W 1803 nt5.34□□□□□ -1.55
PUB1P32588 VHT1YGR065C 1782 nt5.34□□□□□ -1.56
PUB1P32588 ERC1YHR032W 1746 nt5.34□□□□□ -1.56 RIP-Chip
PUB1P32588 YGL176CYGL176C 1665 nt5.34□□□□□ -1.56 RIP-Chip
PUB1P32588 YIG1YPL201C 1386 nt5.33□□□□□ -1.56
PUB1P32588 YHR202WYHR202W 1809 nt5.33□□□□□ -1.56 RIP-Chip
PUB1P32588 RME1YGR044C 903 nt5.33□□□□□ -1.56 RIP-Chip
PUB1P32588 YGR045CYGR045C 363 nt5.33□□□□□ -1.56 RIP-Chip
PUB1P32588 RHO5YNL180C 996 nt5.33□□□□□ -1.56
PUB1P32588 RGS2YOR107W 930 nt5.33□□□□□ -1.56 RIP-Chip
PUB1P32588 CAF20YOR276W 486 nt5.33□□□□□ -1.56 RIP-Chip
PUB1P32588 PYC1YGL062W 3537 nt5.33□□□□□ -1.56
PUB1P32588 ATP1YBL099W 1638 nt5.33□□□□□ -1.56
PUB1P32588 DSF1YEL070W 1509 nt5.33□□□□□ -1.56
PUB1P32588 YNR073CYNR073C 1509 nt5.33□□□□□ -1.56
PUB1P32588 ESA1YOR244W 1338 nt5.32□□□□□ -1.56
PUB1P32588 ICL1YER065C 1674 nt5.32□□□□□ -1.56
PUB1P32588 BSC1YDL037C 987 nt5.32□□□□□ -1.56
PUB1P32588 TRM8YDL201W 861 nt5.32□□□□□ -1.56
PUB1P32588 PHB1YGR132C 864 nt5.32□□□□□ -1.56 RIP-Chip
PUB1P32588 MCM22YJR135C 720 nt5.32□□□□□ -1.56
PUB1P32588 CAP1YKL007W 807 nt5.32□□□□□ -1.56
PUB1P32588 YLR157W-EYLR157W-E 165 nt5.32□□□□□ -1.56
PUB1P32588 VPS71YML041C 843 nt5.32□□□□□ -1.56
PUB1P32588 ERG1YGR175C 1491 nt5.32□□□□□ -1.56 RIP-Chip
PUB1P32588 DIA3YDL024C 1407 nt5.31□□□□□ -1.56
PUB1P32588 UTP7YER082C 1665 nt5.31□□□□□ -1.56
PUB1P32588 RAD24YER173W 1980 nt5.31□□□□□ -1.56
PUB1P32588 ECM7YLR443W 1347 nt5.31□□□□□ -1.56
PUB1P32588 YDR015CYDR015C 240 nt5.31□□□□□ -1.56
PUB1P32588 RUB1YDR139C 234 nt5.31□□□□□ -1.56
PUB1P32588 SPG3YDR504C 384 nt5.31□□□□□ -1.56 RIP-Chip
PUB1P32588 YGR127WYGR127W 939 nt5.31□□□□□ -1.56 RIP-Chip
PUB1P32588 SVP26YHR181W 687 nt5.31□□□□□ -1.56 RIP-Chip
PUB1P32588 YHR213WYHR213W 597 nt5.31□□□□□ -1.56
PUB1P32588 ACF4YJR083C 930 nt5.31□□□□□ -1.56
PUB1P32588 VPH2YKL119C 648 nt5.31□□□□□ -1.56
PUB1P32588 YAR062WYAR062W 597 nt5.31□□□□□ -1.56
PUB1P32588 FLD1YLR404W 858 nt5.31□□□□□ -1.56 RIP-Chip
PUB1P32588 AEP2YMR282C 1743 nt5.31□□□□□ -1.56
PUB1P32588 OST1YJL002C 1431 nt5.31□□□□□ -1.56 RIP-Chip
PUB1P32588 FBP26YJL155C 1359 nt5.3□□□□□ -1.56 RIP-Chip
PUB1P32588 ALG2YGL065C 1512 nt5.3□□□□□ -1.56 RIP-Chip
PUB1P32588 YDL057WYDL057W 987 nt5.3□□□□□ -1.56
PUB1P32588 ERD1YDR414C 1089 nt5.3□□□□□ -1.56
PUB1P32588 FYV4YHR059W 393 nt5.3□□□□□ -1.56
PUB1P32588 YHR127WYHR127W 732 nt5.3□□□□□ -1.56
PUB1P32588 RPC34YNR003C 954 nt5.3□□□□□ -1.56
PUB1P32588 YBL096CYBL096C 309 nt5.3□□□□□ -1.56
PUB1P32588 NGL1YOL042W 1092 nt5.3□□□□□ -1.56 RIP-Chip
PUB1P32588 ATX2YOR079C 942 nt5.3□□□□□ -1.56 RIP-Chip
PUB1P32588 YOR314WYOR314W 330 nt5.3□□□□□ -1.56
PUB1P32588 GPX2YBR244W 489 nt5.3□□□□□ -1.56
PUB1P32588 STE12YHR084W 2067 nt5.3□□□□□ -1.56
PUB1P32588 YMR1YJR110W 2067 nt5.3□□□□□ -1.56 RIP-Chip
PUB1P32588 GIT1YCR098C 1557 nt5.29□□□□□ -1.56
PUB1P32588 LYS21YDL131W 1323 nt5.29□□□□□ -1.56
PUB1P32588 IDP1YDL066W 1287 nt5.29□□□□□ -1.56
PUB1P32588 MRPL7YDR237W 879 nt5.29□□□□□ -1.56 RIP-Chip
PUB1P32588 SUP19tS(UGA)E 82 nt5.29□□□□□ -1.56
PUB1P32588 SUP17tS(UGA)I 82 nt5.29□□□□□ -1.56
PUB1P32588 SUP16tS(UGA)P 82 nt5.29□□□□□ -1.56
PUB1P32588 YHR214WYHR214W 612 nt5.29□□□□□ -1.56
PUB1P32588 TPM2YIL138C 486 nt5.29□□□□□ -1.56
PUB1P32588 DJP1YIR004W 1299 nt5.29□□□□□ -1.56
PUB1P32588 YKL183C-AYKL183C-A 213 nt5.29□□□□□ -1.56
PUB1P32588 YKR011CYKR011C 1062 nt5.29□□□□□ -1.56
PUB1P32588 RPC37YKR025W 849 nt5.29□□□□□ -1.56
PUB1P32588 YAR066WYAR066W 612 nt5.29□□□□□ -1.56
PUB1P32588 YLR347W-AYLR347W-A 141 nt5.29□□□□□ -1.56
PUB1P32588 MRPL44YMR225C 297 nt5.29□□□□□ -1.56
PUB1P32588 MED7YOL135C 669 nt5.29□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms