Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC29.54■■■□□ 2.32
CSB-PGBD3P0DP91 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CSB-PGBD3P0DP91 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
CSB-PGBD3P0DP91 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
CSB-PGBD3P0DP91 PPP1R14BP3-201ENST00000509033 445 ntBASIC29.54■■■□□ 2.32
CSB-PGBD3P0DP91 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC29.54■■■□□ 2.32
CSB-PGBD3P0DP91 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC29.54■■■□□ 2.32
CSB-PGBD3P0DP91 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
CSB-PGBD3P0DP91 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC29.54■■■□□ 2.32
CSB-PGBD3P0DP91 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CSB-PGBD3P0DP91 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CSB-PGBD3P0DP91 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CSB-PGBD3P0DP91 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC29.53■■■□□ 2.32
CSB-PGBD3P0DP91 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
CSB-PGBD3P0DP91 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CSB-PGBD3P0DP91 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CSB-PGBD3P0DP91 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
CSB-PGBD3P0DP91 BX005040.4-201ENST00000637145 1518 ntBASIC29.52■■■□□ 2.32
CSB-PGBD3P0DP91 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
CSB-PGBD3P0DP91 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC29.52■■■□□ 2.32
CSB-PGBD3P0DP91 AC006970.2-201ENST00000450065 779 ntBASIC29.52■■■□□ 2.32
CSB-PGBD3P0DP91 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC29.52■■■□□ 2.32
CSB-PGBD3P0DP91 EMC9-206ENST00000560403 872 ntTSL 2 BASIC29.52■■■□□ 2.32
CSB-PGBD3P0DP91 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC29.52■■■□□ 2.32
CSB-PGBD3P0DP91 AC104771.1-201ENST00000603335 964 ntBASIC29.52■■■□□ 2.32
CSB-PGBD3P0DP91 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
CSB-PGBD3P0DP91 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
CSB-PGBD3P0DP91 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CSB-PGBD3P0DP91 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CSB-PGBD3P0DP91 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
CSB-PGBD3P0DP91 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CSB-PGBD3P0DP91 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
CSB-PGBD3P0DP91 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC29.51■■■□□ 2.31
CSB-PGBD3P0DP91 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC29.51■■■□□ 2.31
CSB-PGBD3P0DP91 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC29.51■■■□□ 2.31
CSB-PGBD3P0DP91 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC29.51■■■□□ 2.31
CSB-PGBD3P0DP91 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC29.51■■■□□ 2.31
CSB-PGBD3P0DP91 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC29.51■■■□□ 2.31
CSB-PGBD3P0DP91 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CSB-PGBD3P0DP91 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC29.5■■■□□ 2.31
CSB-PGBD3P0DP91 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC29.5■■■□□ 2.31
CSB-PGBD3P0DP91 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CSB-PGBD3P0DP91 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
CSB-PGBD3P0DP91 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CSB-PGBD3P0DP91 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC29.5■■■□□ 2.31
CSB-PGBD3P0DP91 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
CSB-PGBD3P0DP91 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC29.5■■■□□ 2.31
CSB-PGBD3P0DP91 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CSB-PGBD3P0DP91 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC29.49■■■□□ 2.31
CSB-PGBD3P0DP91 MAP2K4P1-201ENST00000438453 1195 ntBASIC29.49■■■□□ 2.31
CSB-PGBD3P0DP91 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC29.49■■■□□ 2.31
CSB-PGBD3P0DP91 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC29.49■■■□□ 2.31
CSB-PGBD3P0DP91 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
CSB-PGBD3P0DP91 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
CSB-PGBD3P0DP91 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
CSB-PGBD3P0DP91 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CSB-PGBD3P0DP91 AL355802.2-201ENST00000402069 882 ntBASIC29.48■■■□□ 2.31
CSB-PGBD3P0DP91 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
CSB-PGBD3P0DP91 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CSB-PGBD3P0DP91 WWOX-218ENST00000627394 894 ntTSL 5 BASIC29.48■■■□□ 2.31
CSB-PGBD3P0DP91 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC29.48■■■□□ 2.31
CSB-PGBD3P0DP91 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
CSB-PGBD3P0DP91 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
CSB-PGBD3P0DP91 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC29.48■■■□□ 2.31
CSB-PGBD3P0DP91 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CSB-PGBD3P0DP91 AC004687.1-201ENST00000579003 1625 ntBASIC29.47■■■□□ 2.31
CSB-PGBD3P0DP91 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
CSB-PGBD3P0DP91 KRT19P1-201ENST00000405746 1186 ntBASIC29.47■■■□□ 2.31
CSB-PGBD3P0DP91 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
CSB-PGBD3P0DP91 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
CSB-PGBD3P0DP91 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC29.47■■■□□ 2.31
CSB-PGBD3P0DP91 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CSB-PGBD3P0DP91 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CSB-PGBD3P0DP91 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CSB-PGBD3P0DP91 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
CSB-PGBD3P0DP91 CROCCP5-201ENST00000436658 830 ntBASIC29.46■■■□□ 2.31
CSB-PGBD3P0DP91 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC29.46■■■□□ 2.31
CSB-PGBD3P0DP91 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC29.46■■■□□ 2.31
CSB-PGBD3P0DP91 AL109923.1-201ENST00000618799 583 ntBASIC29.46■■■□□ 2.31
CSB-PGBD3P0DP91 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
CSB-PGBD3P0DP91 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC29.46■■■□□ 2.31
CSB-PGBD3P0DP91 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
CSB-PGBD3P0DP91 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
CSB-PGBD3P0DP91 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC29.45■■■□□ 2.31
CSB-PGBD3P0DP91 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
CSB-PGBD3P0DP91 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
CSB-PGBD3P0DP91 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC29.45■■■□□ 2.31
CSB-PGBD3P0DP91 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC29.45■■■□□ 2.31
CSB-PGBD3P0DP91 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CSB-PGBD3P0DP91 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.3
CSB-PGBD3P0DP91 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
CSB-PGBD3P0DP91 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
CSB-PGBD3P0DP91 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
CSB-PGBD3P0DP91 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC29.43■■■□□ 2.3
CSB-PGBD3P0DP91 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC29.43■■■□□ 2.3
CSB-PGBD3P0DP91 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CSB-PGBD3P0DP91 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC29.43■■■□□ 2.3
CSB-PGBD3P0DP91 EI24-211ENST00000534546 1544 ntTSL 2 BASIC29.43■■■□□ 2.3
CSB-PGBD3P0DP91 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
CSB-PGBD3P0DP91 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms