Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 YFR045WYFR045W 930 nt4.42□□□□□ -1.7
TY2A-LR1P0C2J4 YAE1YJR067C 426 nt4.42□□□□□ -1.7
TY2A-LR1P0C2J4 YKR015CYKR015C 1707 nt4.42□□□□□ -1.7
TY2A-LR1P0C2J4 YML094C-AYML094C-A 402 nt4.42□□□□□ -1.7
TY2A-LR1P0C2J4 YNR042WYNR042W 429 nt4.42□□□□□ -1.7
TY2A-LR1P0C2J4 MVD1YNR043W 1191 nt4.42□□□□□ -1.7
TY2A-LR1P0C2J4 MGR2YPL098C 342 nt4.42□□□□□ -1.7
TY2A-LR1P0C2J4 GAL4YPL248C 2646 nt4.42□□□□□ -1.7
TY2A-LR1P0C2J4 OAF1YAL051W 3144 nt4.42□□□□□ -1.7
TY2A-LR1P0C2J4 TUB3YML124C 1338 nt4.42□□□□□ -1.7
TY2A-LR1P0C2J4 SBE2YDR351W 2595 nt4.42□□□□□ -1.7
TY2A-LR1P0C2J4 SPB4YFL002C 1821 nt4.42□□□□□ -1.7
TY2A-LR1P0C2J4 YHR182WYHR182W 2358 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 YJL206CYJL206C 2277 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 TYS1YGR185C 1185 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 YIR021W-AYIR021W-A 213 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 MMM1YLL006W 1281 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 YMR105W-AYMR105W-A 195 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 EOS1YNL080C 1101 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 YNL226WYNL226W 411 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 YIF1YNL263C 945 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 YDR034C-CYDR034C-C 1317 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 YRB30YGL164C 1323 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 YLR410W-AYLR410W-A 1317 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 PHO87YCR037C 2772 nt4.41□□□□□ -1.7
TY2A-LR1P0C2J4 KGD1YIL125W 3045 nt4.4□□□□□ -1.7
TY2A-LR1P0C2J4 TPO2YGR138C 1845 nt4.4□□□□□ -1.7
TY2A-LR1P0C2J4 RRP17YDR412W 708 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 SCS2YER120W 735 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 BMH1YER177W 804 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 SEC28YIL076W 891 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 YUH1YJR099W 711 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 YLR163W-AYLR163W-A 114 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 ORM2YLR350W 651 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 UAF30YOR295W 687 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 TAF3YPL011C 1062 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 ATM1YMR301C 2073 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 BCH2YKR027W 2298 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 RTC5YOR118W 1704 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 UBP10YNL186W 2379 nt4.4□□□□□ -1.71
TY2A-LR1P0C2J4 AVT1YJR001W 1809 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 YEL053W-AYEL053W-A 348 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 TYW3YGL050W 822 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 MIC26YGR235C 702 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 SAE3YHR079C-A 276 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 SDS3YIL084C 984 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 tX(XXX)DtX(XXX)D 100 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 YLR365WYLR365W 333 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 YMR010WYMR010W 1218 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 RFM1YOR279C 933 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 TAF14YPL129W 735 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 SPP381YBR152W 876 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 RRB1YMR131C 1536 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 SAP4YGL229C 2457 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 RPN4YDL020C 1596 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 SSB2YNL209W 1842 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 CRT10YOL063C 2874 nt4.39□□□□□ -1.71
TY2A-LR1P0C2J4 MSC7YHR039C 1935 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 BBC1YJL020C 3474 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 MNT2YGL257C 1677 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 ADE6YGR061C 4077 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 YER084WYER084W 387 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 YGR269WYGR269W 327 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 PCL7YIL050W 858 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 SAP30YMR263W 606 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 MCK1YNL307C 1128 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 YBR013CYBR013C 390 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 BTS1YPL069C 1008 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 ECM8YBR076W 1065 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 GLN4YOR168W 2430 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 AXL2YIL140W 2472 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 PST1YDR055W 1335 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 ORC6YHR118C 1308 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 MEF1YLR069C 2286 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 EAR1YMR171C 1653 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 SRS2YJL092W 3525 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 MAG2YLR427W 2013 nt4.38□□□□□ -1.71
TY2A-LR1P0C2J4 HFA1YMR207C 6372 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 PAN1YIR006C 4443 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 CBF5YLR175W 1452 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 MEK1YOR351C 1494 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 LAS21YJL062W 2493 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 CDC48YDL126C 2508 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 TDA7YNL176C 1911 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 YCL075WYCL075W 441 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 YCR075W-AYCR075W-A 228 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 snR7-LsnR7-L 214 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 ARF2YDL137W 546 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 ISC10YER180C 804 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 YHR212W-AYHR212W-A 204 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 YAL064WYAL064W 285 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 YAR061WYAR061W 204 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 SEC72YLR292C 582 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 PML39YML107C 1005 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 HLJ1YMR161W 675 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 INA17YPL099C 549 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 YBR255C-AYBR255C-A 363 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 YTA6YPL074W 2265 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 URC2YDR520C 2319 nt4.37□□□□□ -1.71
TY2A-LR1P0C2J4 TAF5YBR198C 2397 nt4.36□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 33.3 ms