Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
GGPS1O95749 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
GGPS1O95749 AC123595.1-201ENST00000440769 1046 ntBASIC24.87■■□□□ 1.57
GGPS1O95749 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
GGPS1O95749 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
GGPS1O95749 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
GGPS1O95749 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
GGPS1O95749 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
GGPS1O95749 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
GGPS1O95749 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
GGPS1O95749 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
GGPS1O95749 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
GGPS1O95749 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
GGPS1O95749 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.86■■□□□ 1.57
GGPS1O95749 DUX4L2-201ENST00000561772 1275 ntBASIC24.86■■□□□ 1.57
GGPS1O95749 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.86■■□□□ 1.57
GGPS1O95749 DUX4L6-201ENST00000626483 1275 ntBASIC24.86■■□□□ 1.57
GGPS1O95749 DUX4L1-201ENST00000627662 1275 ntBASIC24.86■■□□□ 1.57
GGPS1O95749 DUX4L8-201ENST00000629013 1275 ntBASIC24.86■■□□□ 1.57
GGPS1O95749 DUX4L3-201ENST00000630187 1275 ntBASIC24.86■■□□□ 1.57
GGPS1O95749 DUX4L7-201ENST00000630678 1275 ntBASIC24.86■■□□□ 1.57
GGPS1O95749 DUX4L5-201ENST00000630834 1275 ntBASIC24.86■■□□□ 1.57
GGPS1O95749 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
GGPS1O95749 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.86■■□□□ 1.57
GGPS1O95749 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
GGPS1O95749 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC24.86■■□□□ 1.57
GGPS1O95749 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
GGPS1O95749 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
GGPS1O95749 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
GGPS1O95749 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.85■■□□□ 1.57
GGPS1O95749 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.85■■□□□ 1.57
GGPS1O95749 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.85■■□□□ 1.57
GGPS1O95749 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.85■■□□□ 1.57
GGPS1O95749 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
GGPS1O95749 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
GGPS1O95749 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.85■■□□□ 1.57
GGPS1O95749 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
GGPS1O95749 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
GGPS1O95749 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
GGPS1O95749 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.84■■□□□ 1.57
GGPS1O95749 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
GGPS1O95749 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
GGPS1O95749 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
GGPS1O95749 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
GGPS1O95749 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
GGPS1O95749 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
GGPS1O95749 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.84■■□□□ 1.57
GGPS1O95749 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
GGPS1O95749 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
GGPS1O95749 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.84■■□□□ 1.57
GGPS1O95749 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
GGPS1O95749 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
GGPS1O95749 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
GGPS1O95749 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.83■■□□□ 1.57
GGPS1O95749 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.83■■□□□ 1.57
GGPS1O95749 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.83■■□□□ 1.57
GGPS1O95749 AC105233.4-201ENST00000642045 216 ntBASIC24.83■■□□□ 1.57
GGPS1O95749 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
GGPS1O95749 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
GGPS1O95749 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.82■■□□□ 1.56
GGPS1O95749 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
GGPS1O95749 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.82■■□□□ 1.56
GGPS1O95749 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
GGPS1O95749 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
GGPS1O95749 KRT18P5-201ENST00000436075 1291 ntBASIC24.82■■□□□ 1.56
GGPS1O95749 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.82■■□□□ 1.56
GGPS1O95749 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
GGPS1O95749 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
GGPS1O95749 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
GGPS1O95749 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
GGPS1O95749 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
GGPS1O95749 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.81■■□□□ 1.56
GGPS1O95749 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
GGPS1O95749 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.81■■□□□ 1.56
GGPS1O95749 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
GGPS1O95749 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
GGPS1O95749 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
GGPS1O95749 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
GGPS1O95749 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
GGPS1O95749 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.81■■□□□ 1.56
GGPS1O95749 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
GGPS1O95749 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
GGPS1O95749 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
GGPS1O95749 CCDC92B-201ENST00000575506 885 ntBASIC24.81■■□□□ 1.56
GGPS1O95749 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC24.81■■□□□ 1.56
GGPS1O95749 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.81■■□□□ 1.56
GGPS1O95749 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
GGPS1O95749 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC24.8■■□□□ 1.56
GGPS1O95749 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
GGPS1O95749 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC24.8■■□□□ 1.56
GGPS1O95749 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.8■■□□□ 1.56
GGPS1O95749 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
GGPS1O95749 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.8■■□□□ 1.56
GGPS1O95749 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
GGPS1O95749 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.8■■□□□ 1.56
GGPS1O95749 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.8■■□□□ 1.56
GGPS1O95749 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
GGPS1O95749 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.79■■□□□ 1.56
GGPS1O95749 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
GGPS1O95749 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms