Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF4O60810 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.3■■□□□ 1
PRAMEF4O60810 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.3■■□□□ 1
PRAMEF4O60810 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.3■■□□□ 1
PRAMEF4O60810 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.3■■□□□ 1
PRAMEF4O60810 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PRAMEF4O60810 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
PRAMEF4O60810 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF4O60810 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF4O60810 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF4O60810 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.29■■□□□ 1
PRAMEF4O60810 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF4O60810 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF4O60810 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.29■■□□□ 1
PRAMEF4O60810 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.29■■□□□ 1
PRAMEF4O60810 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF4O60810 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF4O60810 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF4O60810 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.29■■□□□ 1
PRAMEF4O60810 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.29■■□□□ 1
PRAMEF4O60810 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PRAMEF4O60810 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF4O60810 AC127496.7-201ENST00000625110 1798 ntBASIC21.28■■□□□ 1
PRAMEF4O60810 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.28■■□□□ 1
PRAMEF4O60810 AC131281.2-201ENST00000520478 145 ntBASIC21.28■■□□□ 1
PRAMEF4O60810 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
PRAMEF4O60810 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
PRAMEF4O60810 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.28■■□□□ 1
PRAMEF4O60810 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.28■■□□□ 1
PRAMEF4O60810 AC241377.3-202ENST00000626088 1088 ntBASIC21.28■■□□□ 1
PRAMEF4O60810 AC241585.3-202ENST00000628937 1088 ntBASIC21.28■■□□□ 1
PRAMEF4O60810 AC245100.8-202ENST00000629247 1058 ntBASIC21.28■■□□□ 1
PRAMEF4O60810 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PRAMEF4O60810 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF4O60810 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.28■■□□□ 1
PRAMEF4O60810 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.28■■□□□ 1
PRAMEF4O60810 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF4O60810 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.28■■□□□ 1
PRAMEF4O60810 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF4O60810 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.27■■□□□ 1
PRAMEF4O60810 AC080038.3-201ENST00000623346 1952 ntBASIC21.27■■□□□ 1
PRAMEF4O60810 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PRAMEF4O60810 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF4O60810 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.27■■□□□ 1
PRAMEF4O60810 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.27■■□□□ 1
PRAMEF4O60810 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF4O60810 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF4O60810 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF4O60810 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.27■■□□□ 1
PRAMEF4O60810 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF4O60810 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF4O60810 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF4O60810 AC079834.2-201ENST00000609776 1949 ntBASIC21.27■■□□□ 1
PRAMEF4O60810 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.27■■□□□ 1
PRAMEF4O60810 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PRAMEF4O60810 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRAMEF4O60810 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF4O60810 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
PRAMEF4O60810 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF4O60810 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF4O60810 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PRAMEF4O60810 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF4O60810 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.26■□□□□ 0.99
PRAMEF4O60810 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PRAMEF4O60810 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.26■□□□□ 0.99
PRAMEF4O60810 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.26■□□□□ 0.99
PRAMEF4O60810 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF4O60810 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF4O60810 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF4O60810 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF4O60810 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.25■□□□□ 0.99
PRAMEF4O60810 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF4O60810 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.25■□□□□ 0.99
PRAMEF4O60810 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF4O60810 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PRAMEF4O60810 pRNA.6-201ENST00000610482 90 ntBASIC21.25■□□□□ 0.99
PRAMEF4O60810 pRNA.5-201ENST00000612139 90 ntBASIC21.25■□□□□ 0.99
PRAMEF4O60810 pRNA.11-201ENST00000618423 90 ntBASIC21.25■□□□□ 0.99
PRAMEF4O60810 pRNA.13-201ENST00000619112 90 ntBASIC21.25■□□□□ 0.99
PRAMEF4O60810 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF4O60810 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF4O60810 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF4O60810 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF4O60810 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.25■□□□□ 0.99
PRAMEF4O60810 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.25■□□□□ 0.99
PRAMEF4O60810 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.25■□□□□ 0.99
PRAMEF4O60810 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PRAMEF4O60810 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF4O60810 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF4O60810 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF4O60810 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF4O60810 ECEL1P1-201ENST00000373592 1742 ntBASIC21.24■□□□□ 0.99
PRAMEF4O60810 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
PRAMEF4O60810 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF4O60810 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
PRAMEF4O60810 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.24■□□□□ 0.99
PRAMEF4O60810 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.24■□□□□ 0.99
PRAMEF4O60810 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.24■□□□□ 0.99
PRAMEF4O60810 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF4O60810 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms